RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TXNRD3	Q86VQ6	643 aa		6.62	□□□□□ -1.35
LRRC28-222	ENST00000561431	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC28-222	ENST00000561431	TNFRSF10B	O14763	440 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	ADH7	P40394	386 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	DNM1	Q05193	864 aa	Known RBP	6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	MCTP1	Q6DN14	999 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	POTEA	Q6S8J7	498 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	TREML1	Q86YW5	311 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	HSH2D	Q96JZ2	352 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	SUSD3	Q96L08	255 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	FAM13B	Q9NYF5	915 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	DCTN4	Q9UJW0	460 aa		6.61	□□□□□ -1.35
LRRC28-222	ENST00000561431	MICAL2	O94851	1124 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	ELN	P15502	786 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	ZAP70	P43403	619 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	SFSWAP	Q12872	951 aa	Known RBP	6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	TRAPPC3L	Q5T215	181 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	ATCAY	Q86WG3	371 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	TP53INP1	Q96A56	240 aa		6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	LENG1	Q96BZ8	264 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431	GPC6	Q9Y625	555 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC28-222	ENST00000561431		A0A0A0MRY4	1105 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	TGFBR3L	H3BV60	316 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	ZBTB39	O15060	712 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	ARHGAP4	P98171	946 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	SHISA2	Q6UWI4	295 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	ETFBKMT	Q8IXQ9	262 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	ZNF280C	Q8ND82	737 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	GPR152	Q8TDT2	470 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	CEP63	Q96MT8	703 aa		6.59	□□□□□ -1.35
LRRC28-222	ENST00000561431	NPR3	P17342	541 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	NRG1	Q02297	640 aa	Predicted RBP	6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	C8orf34	Q49A92	452 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	RGL4	Q8IZJ4	473 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	C7orf43	Q8WVR3	580 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	PIK3R5	Q8WYR1	880 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	EDEM1	Q92611	657 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	CCDC87	Q9NVE4	849 aa		6.58	□□□□□ -1.36
LRRC28-222	ENST00000561431	ANKRD33B	A6NCL7	494 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	LILRB5	O75023	590 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	EPB42	P16452	691 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	ERCC3	P19447	782 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	USP5	P45974	858 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	IDH3A	P50213	366 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	SPEM2	Q0P670	501 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	PDE3B	Q13370	1112 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	BTLA	Q7Z6A9	289 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	CMTR1	Q8N1G2	835 aa	Known RBP	6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	RNF112	Q9ULX5	631 aa		6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.57	□□□□□ -1.36
LRRC28-222	ENST00000561431	MZF1	P28698	734 aa	Predicted RBP	6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	ARSD	P51689	593 aa		6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	FAM26D	Q5JW98	314 aa		6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	RGS22	Q8NE09	1264 aa		6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	POLI	Q9UNA4	740 aa		6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	BCS1L	Q9Y276	419 aa		6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.56	□□□□□ -1.36
LRRC28-222	ENST00000561431	FZD6	O60353	706 aa		6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	RPLP1	P05386	114 aa	Known RBP	6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	IER5	Q5VY09	327 aa		6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	NUDT16	Q96DE0	195 aa	Known RBP	6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	CITED4	Q96RK1	184 aa		6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	WIZ	O95785	1651 aa		6.55	□□□□□ -1.36
LRRC28-222	ENST00000561431	COL17A1	Q9UMD9	1497 aa	Predicted RBP	6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	RAC1	P63000	192 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	NEUROD1	Q13562	356 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	ECM1	Q16610	540 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	ASB16	Q96NS5	453 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	BRD7	Q9NPI1	651 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	USP20	Q9Y2K6	914 aa		6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	RTCB	Q9Y3I0	505 aa	Known RBP	6.54	□□□□□ -1.36
LRRC28-222	ENST00000561431	UBAP1L	F5GYI3	381 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	PDGFA	P04085	211 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	RBM25	P49756	843 aa	Known RBP	6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	PLCB3	Q01970	1234 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	EHHADH	Q08426	723 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	ILDR2	Q71H61	639 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	TMC7	Q7Z402	723 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	NPM2	Q86SE8	214 aa	Known RBP	6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	BCL2L13	Q9BXK5	485 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	RBCK1	Q9BYM8	510 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	KRTAP4-7	Q9BYR0	210 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	BCL11A	Q9H165	835 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	USP21	Q9UK80	565 aa		6.53	□□□□□ -1.36
LRRC28-222	ENST00000561431	OPLAH	O14841	1288 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	PAX4	O43316	350 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	MAPK8	P45983	427 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	TYRO3	Q06418	890 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	LCE1D	Q5T752	114 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	FMR1NB	Q8N0W7	255 aa	Predicted RBP	6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	DMRTB1	Q96MA1	342 aa		6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	JPH1	Q9HDC5	661 aa	Predicted RBP	6.52	□□□□□ -1.37
LRRC28-222	ENST00000561431	RSF1	Q96T23	1441 aa	Predicted RBP	6.51	□□□□□ -1.37
LRRC28-222	ENST00000561431	NES	P48681	1621 aa		6.51	□□□□□ -1.37
LRRC28-222	ENST00000561431	NEFL	P07196	543 aa		6.51	□□□□□ -1.37
LRRC28-222	ENST00000561431	INPP5B	P32019	993 aa		6.51	□□□□□ -1.37
LRRC28-222	ENST00000561431	AFF1	P51825	1210 aa	Known RBP	6.51	□□□□□ -1.37

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