RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 EMP3P54852 163 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 PPP1R42Q7Z4L9 355 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 C8orf58Q8NAV2 365 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 RPGRQ92834 1020 aaKnown RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 UTP14AQ9BVJ6 771 aaKnown RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 ABCC4O15439 1325 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 A0A1B0GUL6 1792 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 TCERG1O14776 1098 aaKnown RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 ALDH1B1P30837 517 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 GNAI1P63096 354 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 SLC10A5Q5PT55 438 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 TSPYL6Q8N831 410 aa9.62□□□□□ -0.87
ZEB1-223ENST00000561304 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 TSR2Q969E8 191 aaKnown RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-223ENST00000561304 SCN9AQ15858 1988 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-223ENST00000561304 PSME4Q14997 1843 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 PPEF1O14829 653 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-223ENST00000561304 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-223ENST00000561304 IARSP41252 1262 aaKnown RBP9.61□□□□□ -0.87
ZEB1-223ENST00000561304 HSP90AB3PQ58FF7 597 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 ISCA1Q9BUE6 129 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
ZEB1-223ENST00000561304 RNF123Q5XPI4 1314 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 APLP1P51693 650 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 FSTL1Q12841 308 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 RTKN2Q8IZC4 609 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 RBM17Q96I25 401 aaKnown RBP9.6□□□□□ -0.87
ZEB1-223ENST00000561304 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 PSMD1Q99460 953 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
ZEB1-223ENST00000561304 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 TRPM7Q96QT4 1865 aa9.6□□□□□ -0.87
ZEB1-223ENST00000561304 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
ZEB1-223ENST00000561304 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
ZEB1-223ENST00000561304 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
ZEB1-223ENST00000561304 DNAJC5GQ8N7S2 189 aa9.59□□□□□ -0.87
ZEB1-223ENST00000561304 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
ZEB1-223ENST00000561304 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
ZEB1-223ENST00000561304 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
ZEB1-223ENST00000561304 FZD9O00144 591 aa9.58□□□□□ -0.88
ZEB1-223ENST00000561304 ANP32CO43423 234 aa9.58□□□□□ -0.88
ZEB1-223ENST00000561304 TBC1D12O60347 775 aa9.58□□□□□ -0.88
ZEB1-223ENST00000561304 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
ZEB1-223ENST00000561304 ATP6V0A2Q9Y487 856 aa9.58□□□□□ -0.88
ZEB1-223ENST00000561304 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
ZEB1-223ENST00000561304 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
ZEB1-223ENST00000561304 MYD88Q99836 296 aa9.57□□□□□ -0.88
ZEB1-223ENST00000561304 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
ZEB1-223ENST00000561304 FANCIQ9NVI1 1328 aa9.57□□□□□ -0.88
ZEB1-223ENST00000561304 GRAPQ13588 217 aa9.56□□□□□ -0.88
ZEB1-223ENST00000561304 AOC3Q16853 763 aa9.56□□□□□ -0.88
ZEB1-223ENST00000561304 G2E3Q7L622 706 aa9.56□□□□□ -0.88
ZEB1-223ENST00000561304 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
ZEB1-223ENST00000561304 GRAPLQ8TC17 118 aaPredicted RBP9.56□□□□□ -0.88
ZEB1-223ENST00000561304 JARID2Q92833 1246 aaPredicted RBP9.56□□□□□ -0.88
ZEB1-223ENST00000561304 CELF1Q92879 486 aaKnown RBP9.56□□□□□ -0.88
ZEB1-223ENST00000561304 TAF1DQ9H5J8 278 aaPredicted RBP9.56□□□□□ -0.88
ZEB1-223ENST00000561304 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
ZEB1-223ENST00000561304 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
ZEB1-223ENST00000561304 TRIM28Q13263 835 aaKnown RBP9.55□□□□□ -0.88
ZEB1-223ENST00000561304 TWISTNBQ3B726 338 aaPredicted RBP9.55□□□□□ -0.88
ZEB1-223ENST00000561304 CCDC30Q5VVM6 783 aa9.55□□□□□ -0.88
ZEB1-223ENST00000561304 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
ZEB1-223ENST00000561304 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
ZEB1-223ENST00000561304 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
ZEB1-223ENST00000561304 IL16Q14005 1332 aa9.55□□□□□ -0.88
ZEB1-223ENST00000561304 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 PPIP5K2O43314 1243 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 IGKV5-2P06315 115 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 SCNN1DP51172 638 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 SF3B3Q15393 1217 aaKnown RBP9.54□□□□□ -0.88
ZEB1-223ENST00000561304 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 SP8Q8IXZ3 490 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 GPC2Q8N158 579 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 KLRG1Q96E93 195 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-223ENST00000561304 RTFDC1Q9BY42 306 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-223ENST00000561304 MAP3K2Q9Y2U5 619 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
ZEB1-223ENST00000561304 IQCA1LA6NCM1 817 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 BBOX1O75936 387 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 EPHX2P34913 555 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms