RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
TPM1-229ENST00000561242 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
TPM1-229ENST00000561242 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
TPM1-229ENST00000561242 RASSF7Q02833 373 aa13.26□□□□□ -0.29
TPM1-229ENST00000561242 RTL9Q8NET4 1388 aa13.26□□□□□ -0.29
TPM1-229ENST00000561242 SIL1Q9H173 461 aa13.26□□□□□ -0.29
TPM1-229ENST00000561242 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
TPM1-229ENST00000561242 MINPP1Q9UNW1 487 aa13.26□□□□□ -0.29
TPM1-229ENST00000561242 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
TPM1-229ENST00000561242 SLC5A1P13866 664 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 LMOD1P29536 600 aaPredicted RBP13.25□□□□□ -0.29
TPM1-229ENST00000561242 GPSM2P81274 684 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 CHRNDQ07001 517 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
TPM1-229ENST00000561242 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
TPM1-229ENST00000561242 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
TPM1-229ENST00000561242 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
TPM1-229ENST00000561242 EYA2O00167 538 aa13.24□□□□□ -0.29
TPM1-229ENST00000561242 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
TPM1-229ENST00000561242 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
TPM1-229ENST00000561242 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
TPM1-229ENST00000561242 GJA3Q9Y6H8 435 aa13.24□□□□□ -0.29
TPM1-229ENST00000561242 NUP98P52948 1817 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 AOC3Q16853 763 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
TPM1-229ENST00000561242 TBC1D16Q8TBP0 767 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
TPM1-229ENST00000561242 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
TPM1-229ENST00000561242 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
TPM1-229ENST00000561242 CIAO1O76071 339 aa13.22□□□□□ -0.29
TPM1-229ENST00000561242 RLBP1P12271 317 aa13.22□□□□□ -0.29
TPM1-229ENST00000561242 UBE4AQ14139 1066 aa13.22□□□□□ -0.29
TPM1-229ENST00000561242 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
TPM1-229ENST00000561242 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
TPM1-229ENST00000561242 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
TPM1-229ENST00000561242 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 NFKBIEO00221 500 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 TAF5LO75529 589 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 CIAPIN1Q6FI81 312 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 RTFDC1Q9BY42 306 aaPredicted RBP13.21□□□□□ -0.29
TPM1-229ENST00000561242 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
TPM1-229ENST00000561242 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
TPM1-229ENST00000561242 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 PDE8BO95263 885 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
TPM1-229ENST00000561242 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 LPIN2Q92539 896 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 COPRSQ9NQ92 184 aa13.2□□□□□ -0.3
TPM1-229ENST00000561242 H7C1D1 291 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 MTX1Q13505 466 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
TPM1-229ENST00000561242 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 POLLQ9UGP5 575 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
TPM1-229ENST00000561242 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 APBB1O00213 710 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 ECE2O60344 883 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 IFIT2P09913 472 aaKnown RBP13.18□□□□□ -0.3
TPM1-229ENST00000561242 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
TPM1-229ENST00000561242 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 KAZALD1Q96I82 304 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 PUS3Q9BZE2 481 aaKnown RBP13.18□□□□□ -0.3
TPM1-229ENST00000561242 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 PA2G4Q9UQ80 394 aaKnown RBP13.18□□□□□ -0.3
TPM1-229ENST00000561242 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
TPM1-229ENST00000561242 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 RAD17O75943 681 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
TPM1-229ENST00000561242 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 GPC2Q8N158 579 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
TPM1-229ENST00000561242 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
TPM1-229ENST00000561242 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
TPM1-229ENST00000561242 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
TPM1-229ENST00000561242 TTLL5Q6EMB2 1281 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms