RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 CCDC171Q6TFL3 1326 aa5.59□□□□□ -1.51
PDE8A-214ENST00000561024 SLIT3O75094 1523 aa5.59□□□□□ -1.51
PDE8A-214ENST00000561024 COL14A1Q05707 1796 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 NEMFO60524 1076 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 IRX3P78415 501 aaPredicted RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 RRS1Q15050 365 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 PTPN14Q15678 1187 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 VPS53Q5VIR6 699 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 TTC6Q86TZ1 520 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 NME9Q86XW9 330 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 CEP120Q8N960 986 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 TDRD7Q8NHU6 1098 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 CACTINQ8WUQ7 758 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 SREK1Q8WXA9 508 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 DDX19AQ9NUU7 478 aaKnown RBP5.59□□□□□ -1.52
PDE8A-214ENST00000561024 DACT1Q9NYF0 836 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 PNMA2Q9UL42 364 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 CCDC61Q9Y6R9 512 aa5.59□□□□□ -1.52
PDE8A-214ENST00000561024 USP6P35125 1406 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 PIK3C2AO00443 1686 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 NRAPQ86VF7 1730 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 TUBGCP6Q96RT7 1819 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 GTPBP6O43824 516 aaPredicted RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CREB3O43889 395 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 LARGE1O95461 756 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CAVIN2O95810 425 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 LIG1P18858 919 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 PDCP20941 246 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 PAX3P23760 479 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CDC25BP30305 580 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 ZNF165P49910 485 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 SLFNL1Q499Z3 407 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 LARP1BQ659C4 914 aaKnown RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 SULT6B1Q6IMI4 303 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CNTROBQ8N137 903 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 NUDT16Q96DE0 195 aaKnown RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 ERO1AQ96HE7 468 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 STK31Q9BXU1 1019 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 SCAND2PQ9GZW5 306 aaPredicted RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 IL1RAPL2Q9NP60 686 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.58□□□□□ -1.522e-7■■■■■ 93.2
PDE8A-214ENST00000561024 PDRG1Q9NUG6 133 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 KLHL42Q9P2K6 505 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 PPP1R1BQ9UD71 204 aaPredicted RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 ZNF215Q9UL58 517 aaPredicted RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 EDC4Q6P2E9 1401 aaKnown RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 ERICH4A6NGS2 130 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 VGLL3A8MV65 326 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 KIF4AO95239 1232 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CPA1P15085 419 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 PSEN1P49768 467 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 RBM6P78332 1123 aaKnown RBP5.58□□□□□ -1.52
PDE8A-214ENST00000561024 SLC20A2Q08357 652 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 RNF20Q5VTR2 975 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 FBXO38Q6PIJ6 1188 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 NUTM1Q86Y26 1132 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 EGFL6Q8IUX8 553 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 LRRC8AQ8IWT6 810 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 CYP46A1Q9Y6A2 500 aa5.58□□□□□ -1.52
PDE8A-214ENST00000561024 SOS1Q07889 1333 aaPredicted RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 HMGB1P1B2RPK0 211 aaPredicted RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 SLU7O95391 586 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CALRP27797 417 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CWC27Q6UX04 472 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 NYAP1Q6ZVC0 841 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CCDC144CPQ8IYA2 1237 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 PI4K2BQ8TCG2 481 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 SPOCK2Q92563 424 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 JAKMIP1Q96N16 626 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 TSPAN18Q96SJ8 248 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 TM6SF1Q9BZW5 370 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CLSTN2Q9H4D0 955 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 MIS18AQ9NYP9 233 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 ZRANB1Q9UGI0 708 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 TSPYL4Q9UJ04 414 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 SPG7Q9UQ90 795 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 LRRFIP2Q9Y608 721 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 KIF2AO00139 706 aaPredicted RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 HTATSF1O43719 755 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 SKILP12757 684 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 BMS1Q14692 1282 aaKnown RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 ELF2Q15723 593 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 ME3Q16798 604 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 CCDC181Q5TID7 509 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 MAMSTRQ6ZN01 415 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 FERMT3Q86UX7 667 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 RUFY2Q8WXA3 655 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 DNAJC25Q9H1X3 360 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 ZSWIM6Q9HCJ5 1215 aa5.57□□□□□ -1.52
PDE8A-214ENST00000561024 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 V9GYY5 206 aaPredicted RBP5.57□□□□□ -1.52
PDE8A-214ENST00000561024 LMO7Q8WWI1 1683 aa5.56□□□□□ -1.52
PDE8A-214ENST00000561024 SLIT2O94813 1529 aa5.56□□□□□ -1.52
PDE8A-214ENST00000561024 TTC21AQ8NDW8 1320 aa5.56□□□□□ -1.52
PDE8A-214ENST00000561024 USP27XA6NNY8 438 aa5.56□□□□□ -1.52
PDE8A-214ENST00000561024 TULP2O00295 520 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms