RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 NUP62CLQ9H1M0 184 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
SNX22-206ENST00000560997 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 LEO1Q8WVC0 666 aaPredicted RBP11.59□□□□□ -0.55
SNX22-206ENST00000560997 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 STRCP1A6NGW2 1772 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 H7C1W4 665 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 A1BGP04217 495 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
SNX22-206ENST00000560997 LAMA4Q16363 1823 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 MRVI1Q9Y6F6 885 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 SCRN1Q12765 414 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 SCAND2PQ9GZW5 306 aaPredicted RBP11.58□□□□□ -0.56
SNX22-206ENST00000560997 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
SNX22-206ENST00000560997 FOSBP53539 338 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 TYRO3Q06418 890 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 RESTQ13127 1097 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 PGBD1Q96JS3 809 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
SNX22-206ENST00000560997 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 TJP1Q07157 1748 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 SPC24Q8NBT2 197 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 PPFIA3O75145 1194 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 LUZP1Q86V48 1076 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
SNX22-206ENST00000560997 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 NUP188Q5SRE5 1749 aa11.57□□□□□ -0.56
SNX22-206ENST00000560997 NR1I2O75469 434 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 FGD1P98174 961 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 NOLC1Q14978 699 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNX22-206ENST00000560997 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
SNX22-206ENST00000560997 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
SNX22-206ENST00000560997 KCNF1Q9H3M0 494 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 PARP4Q9UKK3 1724 aaKnown RBP11.56□□□□□ -0.56
SNX22-206ENST00000560997 H3BQV1 296 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
SNX22-206ENST00000560997 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
SNX22-206ENST00000560997 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 CTDNEP1O95476 244 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 BICD2Q8TD16 824 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 FTOQ9C0B1 505 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX22-206ENST00000560997 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 CHST3Q7LGC8 479 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
SNX22-206ENST00000560997 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 CPDO75976 1380 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 MAST3O60307 1309 aa11.55□□□□□ -0.56
SNX22-206ENST00000560997 PFKFB2O60825 505 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 SMARCC2Q8TAQ2 1214 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 CBX8Q9HC52 389 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 NCOA5Q9HCD5 579 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 PYCARDQ9ULZ3 195 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 A0A1B0GUL7 405 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 EYA2O00167 538 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 IFIT1P09914 478 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 TOM1L2Q6ZVM7 507 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 HELLSQ9NRZ9 838 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
SNX22-206ENST00000560997 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 DCCP43146 1447 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 PCDH11XQ9BZA7 1347 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 DSCC1Q9BVC3 393 aa11.54□□□□□ -0.56
SNX22-206ENST00000560997 PTPDC1A2A3K4 754 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 E7EWF7 191 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 M0R2C6 588 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 EXOSC10Q01780 885 aaKnown RBP11.53□□□□□ -0.56
SNX22-206ENST00000560997 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 RBM43Q6ZSC3 357 aaKnown RBP11.53□□□□□ -0.56
SNX22-206ENST00000560997 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 PDCL3Q9H2J4 239 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 NAP1L2Q9ULW6 460 aaPredicted RBP11.53□□□□□ -0.56
SNX22-206ENST00000560997 ADD1P35611 737 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms