RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
PSMA4-221ENST00000560842 WEE1P30291 646 aa8.66□□□□□ -1.02
PSMA4-221ENST00000560842 Q6ZS46 218 aa8.66□□□□□ -1.02
PSMA4-221ENST00000560842 GSC2O15499 205 aa8.65□□□□□ -1.02
PSMA4-221ENST00000560842 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.02
PSMA4-221ENST00000560842 ARSDP51689 593 aa8.65□□□□□ -1.02
PSMA4-221ENST00000560842 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.02
PSMA4-221ENST00000560842 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
PSMA4-221ENST00000560842 RAXQ9Y2V3 346 aa8.65□□□□□ -1.02
PSMA4-221ENST00000560842 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
PSMA4-221ENST00000560842 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
PSMA4-221ENST00000560842 IGLV1-40P01703 118 aa8.64□□□□□ -1.03
PSMA4-221ENST00000560842 IGFBP4P22692 258 aa8.64□□□□□ -1.03
PSMA4-221ENST00000560842 GP2P55259 537 aaKnown RBP8.64□□□□□ -1.03
PSMA4-221ENST00000560842 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
PSMA4-221ENST00000560842 KLK14Q9P0G3 267 aa8.64□□□□□ -1.03
PSMA4-221ENST00000560842 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
PSMA4-221ENST00000560842 OCLNQ16625 522 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 MAP4K3Q8IVH8 894 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 DCAF11Q8TEB1 546 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 HINFPQ9BQA5 517 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 TLR7Q9NYK1 1049 aaKnown RBP8.63□□□□□ -1.03
PSMA4-221ENST00000560842 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 USTQ9Y2C2 406 aa8.63□□□□□ -1.03
PSMA4-221ENST00000560842 LGR5O75473 907 aa8.62□□□□□ -1.03
PSMA4-221ENST00000560842 MICAL2O94851 1124 aa8.62□□□□□ -1.03
PSMA4-221ENST00000560842 IL22RA1Q8N6P7 574 aa8.62□□□□□ -1.03
PSMA4-221ENST00000560842 PLD4Q96BZ4 506 aa8.62□□□□□ -1.03
PSMA4-221ENST00000560842 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 EGFRP00533 1210 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 TGFB1P01137 390 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 SIK1P57059 783 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 SETDB1Q15047 1291 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 STOML1Q9UBI4 398 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 RNF114Q9Y508 228 aa8.61□□□□□ -1.03
PSMA4-221ENST00000560842 FOXO3O43524 673 aa8.6□□□□□ -1.03
PSMA4-221ENST00000560842 GLB1P16278 677 aa8.6□□□□□ -1.03
PSMA4-221ENST00000560842 DGKZQ13574 1117 aa8.6□□□□□ -1.03
PSMA4-221ENST00000560842 LCE1DQ5T752 114 aa8.6□□□□□ -1.03
PSMA4-221ENST00000560842 UBL7Q96S82 380 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-221ENST00000560842 J3QW42 95 aa8.59□□□□□ -1.03
PSMA4-221ENST00000560842 GDF6Q6KF10 455 aaPredicted RBP8.59□□□□□ -1.03
PSMA4-221ENST00000560842 AGGF1Q8N302 714 aaeCLIP8.59□□□□□ -1.03
PSMA4-221ENST00000560842 KRTAP4-7Q9BYR0 210 aa8.59□□□□□ -1.03
PSMA4-221ENST00000560842 OPLAHO14841 1288 aa8.58□□□□□ -1.04
PSMA4-221ENST00000560842 C11orf91Q3C1V1 193 aa8.58□□□□□ -1.04
PSMA4-221ENST00000560842 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.58□□□□□ -1.04
PSMA4-221ENST00000560842 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
PSMA4-221ENST00000560842 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
PSMA4-221ENST00000560842 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
PSMA4-221ENST00000560842 CXXC1Q9P0U4 656 aaPredicted RBP8.58□□□□□ -1.04
PSMA4-221ENST00000560842 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
PSMA4-221ENST00000560842 DHX15O43143 795 aaKnown RBP8.57□□□□□ -1.04
PSMA4-221ENST00000560842 GHRHP01286 108 aa8.57□□□□□ -1.04
PSMA4-221ENST00000560842 INTS5Q6P9B9 1019 aaKnown RBP8.57□□□□□ -1.04
PSMA4-221ENST00000560842 CACTIN-AS1Q8N1I8 211 aa8.57□□□□□ -1.04
PSMA4-221ENST00000560842 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
PSMA4-221ENST00000560842 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 PSAPP07602 524 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
PSMA4-221ENST00000560842 SPINK2P20155 84 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 PDE4CQ08493 712 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 FZD5Q13467 585 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 ARMC10Q8N2F6 343 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 MUC3BQ9H195 1237 aa8.56□□□□□ -1.04
PSMA4-221ENST00000560842 PRMT3O60678 531 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 XYLBO75191 536 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 SSFA2P28290 1259 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 SOX18P35713 384 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 NFIAQ12857 509 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
PSMA4-221ENST00000560842 MYO19Q96H55 970 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 USP20Q9Y2K6 914 aa8.55□□□□□ -1.04
PSMA4-221ENST00000560842 MMP20O60882 483 aa8.54□□□□□ -1.04
PSMA4-221ENST00000560842 GRIK1P39086 918 aa8.54□□□□□ -1.04
PSMA4-221ENST00000560842 PHLDB3Q6NSJ2 640 aa8.54□□□□□ -1.04
PSMA4-221ENST00000560842 NSUN5Q96P11 429 aaKnown RBP8.54□□□□□ -1.04
PSMA4-221ENST00000560842 PPME1Q9Y570 386 aa8.54□□□□□ -1.04
PSMA4-221ENST00000560842 ATP2B4P23634 1241 aa8.53□□□□□ -1.04
PSMA4-221ENST00000560842 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
PSMA4-221ENST00000560842 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
PSMA4-221ENST00000560842 TRIM33Q9UPN9 1127 aa8.53□□□□□ -1.04
PSMA4-221ENST00000560842 CARNS1A5YM72 827 aa8.52□□□□□ -1.05
PSMA4-221ENST00000560842 PRR19A6NJB7 356 aa8.52□□□□□ -1.05
PSMA4-221ENST00000560842 UVSSAQ2YD98 709 aa8.52□□□□□ -1.05
PSMA4-221ENST00000560842 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
PSMA4-221ENST00000560842 GALNT11Q8NCW6 608 aa8.52□□□□□ -1.05
PSMA4-221ENST00000560842 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
PSMA4-221ENST00000560842 WISP1O95388 367 aa8.51□□□□□ -1.05
PSMA4-221ENST00000560842 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
PSMA4-221ENST00000560842 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
PSMA4-221ENST00000560842 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
PSMA4-221ENST00000560842 LRFN2Q9ULH4 789 aa8.51□□□□□ -1.05
PSMA4-221ENST00000560842 WNT11O96014 354 aa8.5□□□□□ -1.05
PSMA4-221ENST00000560842 CD68P34810 354 aaPredicted RBP8.5□□□□□ -1.05
PSMA4-221ENST00000560842 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
PSMA4-221ENST00000560842 TRIM42Q8IWZ5 723 aa8.5□□□□□ -1.05
PSMA4-221ENST00000560842 FAM46AQ96IP4 442 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1861.3 ms