RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 A6NHS1 94 aa7.03□□□□□ -1.28
TMOD3-207ENST00000560549 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
TMOD3-207ENST00000560549 NSUN5Q96P11 429 aaKnown RBP7.03□□□□□ -1.28
TMOD3-207ENST00000560549 UBAP1LF5GYI3 381 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 J3QW42 95 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 PDIA4P13667 645 aaKnown RBP7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ELNP15502 786 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ITGB7P26010 798 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
TMOD3-207ENST00000560549 NPM2Q86SE8 214 aaKnown RBP7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ABTB2Q8N961 1025 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 NUDT16Q96DE0 195 aaKnown RBP7.02□□□□□ -1.29
TMOD3-207ENST00000560549 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 USTQ9Y2C2 406 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 SMARCA2P51531 1590 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 ATAD2BQ9ULI0 1458 aa7.02□□□□□ -1.29
TMOD3-207ENST00000560549 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
TMOD3-207ENST00000560549 APBA3O96018 575 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 CYP2E1P05181 493 aaPredicted RBP7.01□□□□□ -1.29
TMOD3-207ENST00000560549 SELPP16109 830 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 SOX18P35713 384 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
TMOD3-207ENST00000560549 TRAPPC3LQ5T215 181 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 ADAMTSL4Q6UY14 1074 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 NLRP13Q86W25 1043 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 EDEM1Q92611 657 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 NCAPD3P42695 1498 aa7.01□□□□□ -1.29
TMOD3-207ENST00000560549 LOC105371045A0A1W2PR82 267 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 ADGRE1Q14246 886 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 GRIK4Q16099 956 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 FMR1NBQ8N0W7 255 aaPredicted RBP7□□□□□ -1.29
TMOD3-207ENST00000560549 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 GGNBP2Q9H3C7 697 aa7□□□□□ -1.29
TMOD3-207ENST00000560549 PDGFAP04085 211 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 NPR3P17342 541 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 SERPINB4P48594 390 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 DOC2BQ14184 412 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 ECM1Q16610 540 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
TMOD3-207ENST00000560549 NKAPLQ5M9Q1 402 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 OR13H1Q8NG92 308 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 LENG1Q96BZ8 264 aaPredicted RBP6.99□□□□□ -1.29
TMOD3-207ENST00000560549 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
TMOD3-207ENST00000560549 PEG3Q9GZU2 1588 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 HMGXB3Q12766 1538 aa6.99□□□□□ -1.29
TMOD3-207ENST00000560549 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 C9orf172C9J069 976 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 EIF2AK2P19525 551 aaKnown RBP6.98□□□□□ -1.29
TMOD3-207ENST00000560549 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
TMOD3-207ENST00000560549 SIK1P57059 783 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 RAC1P63000 192 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
TMOD3-207ENST00000560549 MBTPS1Q14703 1052 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
TMOD3-207ENST00000560549 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 FZD6O60353 706 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 PSAPP07602 524 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
TMOD3-207ENST00000560549 ELMSAN1Q6PJG2 1045 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
TMOD3-207ENST00000560549 ABL1P00519 1130 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 ATP11AP98196 1134 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
TMOD3-207ENST00000560549 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.29
TMOD3-207ENST00000560549 ACPPP15309 386 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
TMOD3-207ENST00000560549 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 CCDC87Q9NVE4 849 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 ABI2Q9NYB9 513 aaPredicted RBP6.96□□□□□ -1.3
TMOD3-207ENST00000560549 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 CCDC88BA6NC98 1476 aa6.96□□□□□ -1.3
TMOD3-207ENST00000560549 TOP2AP11388 1531 aaKnown RBP6.95□□□□□ -1.3
TMOD3-207ENST00000560549 KIF4AO95239 1232 aa6.95□□□□□ -1.3
TMOD3-207ENST00000560549 MZF1P28698 734 aaPredicted RBP6.95□□□□□ -1.3
TMOD3-207ENST00000560549 NRG1Q02297 640 aaPredicted RBP6.95□□□□□ -1.3
TMOD3-207ENST00000560549 TXNRD3Q86VQ6 643 aa6.95□□□□□ -1.3
TMOD3-207ENST00000560549 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
TMOD3-207ENST00000560549 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
TMOD3-207ENST00000560549 DEAF1O75398 565 aaPredicted RBP6.94□□□□□ -1.3
TMOD3-207ENST00000560549 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
TMOD3-207ENST00000560549 PDE12Q6L8Q7 609 aaKnown RBP6.94□□□□□ -1.3
TMOD3-207ENST00000560549 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
TMOD3-207ENST00000560549 TXNDC2Q86VQ3 553 aa6.94□□□□□ -1.3
TMOD3-207ENST00000560549 WFDC8Q8IUA0 241 aa6.94□□□□□ -1.3
TMOD3-207ENST00000560549 FNDC3AQ9Y2H6 1198 aaKnown RBP6.94□□□□□ -1.3
TMOD3-207ENST00000560549 DYRK3O43781 588 aa6.93□□□□□ -1.3
TMOD3-207ENST00000560549 ICMTO60725 284 aa6.93□□□□□ -1.3
TMOD3-207ENST00000560549 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
TMOD3-207ENST00000560549 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
TMOD3-207ENST00000560549 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
TMOD3-207ENST00000560549 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms