RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	STX1A	Q16623	288 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	CHST3	Q7LGC8	479 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	MIGA1	Q8NAN2	632 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	TFCP2L1	Q9NZI6	479 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	GNPAT	O15228	680 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	TOP1	P11387	765 aa	Known RBP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	ARHGAP29	Q52LW3	1261 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	KIAA1328	Q86T90	577 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	CCDC191	Q8NCU4	936 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	MAGI2	Q86UL8	1455 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	EYA2	O00167	538 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	GNAT2	P19087	354 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	FKBP15	Q5T1M5	1219 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	CCDC102B	Q68D86	513 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	UBA5	Q9GZZ9	404 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	UGGT1	Q9NYU2	1555 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	SET	Q01105	290 aa	Predicted RBP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	ZSCAN23	Q3MJ62	389 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	USP48	Q86UV5	1035 aa		10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	ZNF496	Q96IT1	587 aa	Predicted RBP	10.78	□□□□□ -0.68
NEO1-208	ENST00000560328	CCDC171	Q6TFL3	1326 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	ITGA6	P23229	1130 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	UBA7	P41226	1012 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	SKIDA1	Q1XH10	827 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	CCDC178	Q5BJE1	867 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	ISM2	Q6H9L7	571 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	CALML4	Q96GE6	196 aa		10.77	□□□□□ -0.68
NEO1-208	ENST00000560328	RAD50	Q92878	1312 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	ZNF165	P49910	485 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	PICALM	Q13492	652 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	TNNI3K	Q59H18	835 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	EHMT1	Q9H9B1	1298 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	FPGT-TNNI3K	V9GXZ4	949 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	PNMA6E	A0A0J9YXQ4	647 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328		A0A1B0GUL7	405 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	GIMAP6	Q6P9H5	292 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	RUFY3	Q7L099	469 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	ANKRD2	Q9GZV1	360 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	MLH3	Q9UHC1	1453 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	KDM5D	Q9BY66	1539 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	F13A1	P00488	732 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	PRIM1	P49642	420 aa	Known RBP	10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	TTLL12	Q14166	644 aa	Predicted RBP	10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	TRAPPC3L	Q5T215	181 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	KDM2B	Q8NHM5	1336 aa		10.77	□□□□□ -0.69
NEO1-208	ENST00000560328	HCLS1	P14317	486 aa	Predicted RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	APOBR	Q0VD83	1088 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	SUCLG2	Q96I99	432 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	KAT6B	Q8WYB5	2073 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	KIAA0232	Q92628	1395 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	UQCRHL	A0A096LP55	91 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	MYO1B	O43795	1136 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	UQCRH	P07919	91 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	EFCAB6	Q5THR3	1501 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	DHX32	Q7L7V1	743 aa	Known RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	IL17RE	Q8NFR9	667 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	SH3TC1	Q8TE82	1336 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	ERVK-7	P63135	1459 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	AMPD3	Q01432	767 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	DNM1	Q05193	864 aa	Known RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	PARP10	Q53GL7	1025 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	KANK3	Q6NY19	840 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	ZNF594	Q96JF6	807 aa	Predicted RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	DBNDD2	Q9BQY9	259 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	FGFR1OP	O95684	399 aa	Known RBP	10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	IDE	P14735	1019 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	SYK	P43405	635 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	GCKR	Q14397	625 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	HELLS	Q9NRZ9	838 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	MCM9	Q9NXL9	1143 aa		10.76	□□□□□ -0.69
NEO1-208	ENST00000560328	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	ADCY5	O95622	1261 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PTPN14	Q15678	1187 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	KCNG4	Q8TDN1	519 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PREX2	Q70Z35	1606 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	ZSCAN12	O43309	604 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	CACNA2D4	Q7Z3S7	1137 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	DNAJC10	Q8IXB1	793 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	CPLX3	Q8WVH0	158 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PYM1	Q9BRP8	204 aa	Known RBP	10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	CCNL1	Q9UK58	526 aa	Predicted RBP	10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PLEKHG1	Q9ULL1	1385 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	KIF20A	O95235	890 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	WDR78	Q5VTH9	848 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	JAG2	Q9Y219	1238 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PARP3	Q9Y6F1	533 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	PDE8A	O60658	829 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	GNAQ	P50148	359 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	SPA17	Q15506	151 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	FAM135B	Q49AJ0	1406 aa		10.75	□□□□□ -0.69
NEO1-208	ENST00000560328	ERLIN2	O94905	339 aa		10.74	□□□□□ -0.69
NEO1-208	ENST00000560328	HEATR3	Q7Z4Q2	680 aa		10.74	□□□□□ -0.69
NEO1-208	ENST00000560328	MYOM2	P54296	1465 aa		10.74	□□□□□ -0.69
NEO1-208	ENST00000560328	KCNQ3	O43525	872 aa		10.74	□□□□□ -0.69
NEO1-208	ENST00000560328	LRSAM1	Q6UWE0	723 aa		10.74	□□□□□ -0.69
NEO1-208	ENST00000560328	LDHB	P07195	334 aa	Known RBP	10.74	□□□□□ -0.69

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