RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 ADAMTS2O95450 1211 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 ADH1AP07327 375 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 NR3C2P08235 984 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 IRX6P78412 446 aaPredicted RBP6.82□□□□□ -1.32
TPM1-222ENST00000560131 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 TINF2Q9BSI4 451 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 CFHR5Q9BXR6 569 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 CCSER2Q9H7U1 834 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 CAPN10Q9HC96 672 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 NLRP2Q9NX02 1062 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 KLK14Q9P0G3 267 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 IGF1RP08069 1367 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 KTN1Q86UP2 1357 aaKnown RBP6.82□□□□□ -1.32
TPM1-222ENST00000560131 ARHGEF11O15085 1522 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 TTLL8A6PVC2 850 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
TPM1-222ENST00000560131 C1orf53Q5VUE5 145 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 ZNF295-AS1Q8N0V1 137 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 BEND7Q8N7W2 519 aaPredicted RBP6.81□□□□□ -1.32
TPM1-222ENST00000560131 TTC16Q8NEE8 873 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 TSEN34Q9BSV6 310 aaKnown RBP6.81□□□□□ -1.32
TPM1-222ENST00000560131 PHACTR1Q9C0D0 580 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 FHDC1Q9C0D6 1143 aaPredicted RBP6.81□□□□□ -1.32
TPM1-222ENST00000560131 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
TPM1-222ENST00000560131 EIF1AYO14602 144 aaKnown RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 HSPA5P11021 654 aaKnown RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 PTGIRP43119 386 aa6.8□□□□□ -1.32
TPM1-222ENST00000560131 GNL2Q13823 731 aaKnown RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 PRKAG2Q9UGJ0 569 aa6.8□□□□□ -1.32
TPM1-222ENST00000560131 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.8□□□□□ -1.32
TPM1-222ENST00000560131 PARP3Q9Y6F1 533 aa6.8□□□□□ -1.32
TPM1-222ENST00000560131 CC2D2AQ9P2K1 1620 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 SUPT6HQ7KZ85 1726 aaKnown RBP6.79□□□□□ -1.32
TPM1-222ENST00000560131 MYOM3Q5VTT5 1437 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 CDC14CA4D256 554 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 NEFMP07197 916 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 ATP2B1P20020 1258 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 ORC1Q13415 861 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 C8orf34Q49A92 452 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 DPH6Q7L8W6 267 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 TREML1Q86YW5 311 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 GPR152Q8TDT2 470 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 NUDT16Q96DE0 195 aaKnown RBP6.79□□□□□ -1.32
TPM1-222ENST00000560131 NLRP3Q96P20 1036 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 ZSCAN10Q96SZ4 725 aaPredicted RBP6.79□□□□□ -1.32
TPM1-222ENST00000560131 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 ACBD3Q9H3P7 528 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 SPG7Q9UQ90 795 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 CTTNBP2Q8WZ74 1663 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 EHBP1L1Q8N3D4 1523 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 CARMIL1Q5VZK9 1371 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 SNAPC4Q5SXM2 1469 aa6.79□□□□□ -1.32
TPM1-222ENST00000560131 CUL7Q14999 1698 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 FIGNL2A6NMB9 653 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 CTSHP09668 335 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 ITGA6P23229 1130 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 BAG6P46379 1132 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 SRSF11Q05519 484 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 FAM50AQ14320 339 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 Q6ZVU0 165 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 ARMC5Q96C12 935 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 CRELD1Q96HD1 420 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 GMLQ99445 158 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 ROCK2O75116 1388 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 LRPPRCP42704 1394 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 DENND4BO75064 1496 aaPredicted RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 RPRD2Q5VT52 1461 aaKnown RBP6.78□□□□□ -1.32
TPM1-222ENST00000560131 TEX14Q8IWB6 1497 aa6.78□□□□□ -1.32
TPM1-222ENST00000560131 PTPRKQ15262 1439 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 MEN1O00255 615 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 GIPC1O14908 333 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
TPM1-222ENST00000560131 MICAL2O94851 1124 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
TPM1-222ENST00000560131 GTF2E1P29083 439 aaPredicted RBP6.77□□□□□ -1.33
TPM1-222ENST00000560131 CBLBQ13191 982 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 HIF1AQ16665 826 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 GLIPR1L2Q4G1C9 344 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 TMEM214Q6NUQ4 689 aaKnown RBP6.77□□□□□ -1.33
TPM1-222ENST00000560131 PODNQ7Z5L7 613 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
TPM1-222ENST00000560131 DHX29Q7Z478 1369 aaKnown RBP6.77□□□□□ -1.33
TPM1-222ENST00000560131 RHBDD1Q8TEB9 315 aa6.76□□□□□ -1.33
TPM1-222ENST00000560131 HIRIP3Q9BW71 556 aaPredicted RBP6.76□□□□□ -1.33
TPM1-222ENST00000560131 DDX41Q9UJV9 622 aaKnown RBP6.76□□□□□ -1.33
TPM1-222ENST00000560131 SAMD9Q5K651 1589 aa6.76□□□□□ -1.33
TPM1-222ENST00000560131 USP31Q70CQ4 1352 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 GTF2F1P35269 517 aaKnown RBP eCLIP6.75□□□□□ -1.33
TPM1-222ENST00000560131 TXLNAP40222 546 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms