RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SAP130Q9H0E3 1048 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 KLK14Q9P0G3 267 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 ANKIB1Q9P2G1 1089 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 SEPT3Q9UH03 358 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 LRFN2Q9ULH4 789 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 BCS1LQ9Y276 419 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 NAA30Q147X3 362 aaPredicted RBP6.42□□□□□ -1.38
CASC4-210ENST00000559550 FRRS1LQ9P0K9 344 aa6.42□□□□□ -1.38
CASC4-210ENST00000559550 ALX3O95076 343 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 DGKZQ13574 1117 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 COX20Q5RI15 118 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 Q6ZS46 218 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 TMEM130Q8N3G9 435 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 MYO19Q96H55 970 aa6.41□□□□□ -1.38
CASC4-210ENST00000559550 IGLV1-40P01703 118 aa6.4□□□□□ -1.38
CASC4-210ENST00000559550 FAM26DQ5JW98 314 aa6.4□□□□□ -1.38
CASC4-210ENST00000559550 TTC9Q92623 222 aa6.4□□□□□ -1.38
CASC4-210ENST00000559550 COL26A1Q96A83 441 aa6.4□□□□□ -1.38
CASC4-210ENST00000559550 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
CASC4-210ENST00000559550 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
CASC4-210ENST00000559550 TNFRSF10BO14763 440 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 C16orf46Q6P387 395 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 BTLAQ7Z6A9 289 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 ADGRE2Q9UHX3 823 aa6.39□□□□□ -1.39
CASC4-210ENST00000559550 DMGDHQ9UI17 866 aaKnown RBP6.39□□□□□ -1.39
CASC4-210ENST00000559550 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.39□□□□□ -1.39
CASC4-210ENST00000559550 PTCD1O75127 700 aaKnown RBP6.38□□□□□ -1.39
CASC4-210ENST00000559550 CPB1P15086 417 aa6.38□□□□□ -1.39
CASC4-210ENST00000559550 FAM35AQ86V20 835 aa6.38□□□□□ -1.39
CASC4-210ENST00000559550 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
CASC4-210ENST00000559550 RAXQ9Y2V3 346 aa6.38□□□□□ -1.39
CASC4-210ENST00000559550 TGFBR3LH3BV60 316 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 GSC2O15499 205 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 NFKB1P19838 968 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 GRNP28799 593 aaKnown RBP6.37□□□□□ -1.39
CASC4-210ENST00000559550 C11orf91Q3C1V1 193 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 DTX1Q86Y01 620 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 ETFBKMTQ8IXQ9 262 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 IFT43Q96FT9 208 aa6.37□□□□□ -1.39
CASC4-210ENST00000559550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.39
CASC4-210ENST00000559550 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
CASC4-210ENST00000559550 IER5Q5VY09 327 aa6.36□□□□□ -1.39
CASC4-210ENST00000559550 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
CASC4-210ENST00000559550 PRR19A6NJB7 356 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 ZBTB39O15060 712 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 MICAL2O94851 1124 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 INPP5BP32019 993 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 IDH3AP50213 366 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 CCINQ13939 588 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 HIF1AQ16665 826 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 TRPM4Q8TD43 1214 aa6.35□□□□□ -1.39
CASC4-210ENST00000559550 GTF3C2Q8WUA4 911 aaPredicted RBP6.35□□□□□ -1.39
CASC4-210ENST00000559550 OPLAHO14841 1288 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 PCSK7Q16549 785 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 OGFOD2Q6N063 350 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 INTS5Q6P9B9 1019 aaKnown RBP6.34□□□□□ -1.39
CASC4-210ENST00000559550 TREML1Q86YW5 311 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 UBL7Q96S82 380 aaPredicted RBP6.34□□□□□ -1.39
CASC4-210ENST00000559550 ZFATQ9P243 1243 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 USP20Q9Y2K6 914 aa6.34□□□□□ -1.39
CASC4-210ENST00000559550 SERPINB4P48594 390 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 PDE4CQ08493 712 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 ZNF211Q13398 564 aaPredicted RBP6.33□□□□□ -1.4
CASC4-210ENST00000559550 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 ELMSAN1Q6PJG2 1045 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 ARMC10Q8N2F6 343 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 PNMA5Q96PV4 448 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 ANO2Q9NQ90 1003 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 STIM2Q9P246 746 aa6.33□□□□□ -1.4
CASC4-210ENST00000559550 WNT11O96014 354 aa6.32□□□□□ -1.4
CASC4-210ENST00000559550 BRD2P25440 801 aaKnown RBP6.32□□□□□ -1.4
CASC4-210ENST00000559550 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
CASC4-210ENST00000559550 TXNDC2Q86VQ3 553 aa6.32□□□□□ -1.4
CASC4-210ENST00000559550 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
CASC4-210ENST00000559550 STOML1Q9UBI4 398 aa6.32□□□□□ -1.4
CASC4-210ENST00000559550 ABL1P00519 1130 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 C8AP07357 584 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 ARID4AP29374 1257 aaPredicted RBP6.31□□□□□ -1.4
CASC4-210ENST00000559550 ARSDP51689 593 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 GPLD1P80108 840 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 NFIAQ12857 509 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 ATCAYQ86WG3 371 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 RGL4Q8IZJ4 473 aa6.31□□□□□ -1.4
CASC4-210ENST00000559550 SMG9Q9H0W8 520 aaKnown RBP6.31□□□□□ -1.4
CASC4-210ENST00000559550 BRD1O95696 1058 aa6.3□□□□□ -1.4
CASC4-210ENST00000559550 MPSTP25325 297 aa6.3□□□□□ -1.4
CASC4-210ENST00000559550 ZAP70P43403 619 aa6.3□□□□□ -1.4
CASC4-210ENST00000559550 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.3□□□□□ -1.4
CASC4-210ENST00000559550 TRAIPQ9BWF2 469 aa6.3□□□□□ -1.4
CASC4-210ENST00000559550 RTCBQ9Y3I0 505 aaKnown RBP6.3□□□□□ -1.4
CASC4-210ENST00000559550 GRIK1P39086 918 aa6.29□□□□□ -1.4
CASC4-210ENST00000559550 MLLT1Q03111 559 aaPredicted RBP6.29□□□□□ -1.4
CASC4-210ENST00000559550 SETDB1Q15047 1291 aa6.29□□□□□ -1.4
CASC4-210ENST00000559550 POU5F2Q8N7G0 328 aa6.29□□□□□ -1.4
CASC4-210ENST00000559550 GLB1P16278 677 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms