RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 DSG3P32926 999 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 EIF4A2Q14240 407 aaKnown RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 KIAA1614Q5VZ46 1190 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 WWC2Q6AWC2 1192 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 ZNF449Q6P9G9 518 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 RBM12BQ8IXT5 1001 aaKnown RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 TEX9Q8N6V9 391 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 FLCNQ8NFG4 579 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 WDR66Q8TBY9 1149 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 NELL1Q92832 810 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 NACC2Q96BF6 587 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 PGBD4Q96DM1 585 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 TRIM11Q96F44 468 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 GPR101Q96P66 508 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 BAG1Q99933 345 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 SGIP1Q9BQI5 828 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 TGIF2Q9GZN2 237 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 ZNHIT6Q9NWK9 470 aaKnown RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 BIN2Q9UBW5 565 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 GTF3C4Q9UKN8 822 aa6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 BRD4O60885 1362 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P47-201ENST00000559378 SMTNL1A8MU46 457 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 F8VZ95 297 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 TSPAN6O43657 245 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 SGTAO43765 313 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 HARSP12081 509 aaKnown RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 TNNT3P45378 269 aaPredicted RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 UBXN2AP68543 259 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 NSUN2Q08J23 767 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 MAP2K5Q13163 448 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 GNL2Q13823 731 aaKnown RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 MRPL58Q14197 206 aaKnown RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 CCDC144CPQ8IYA2 1237 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 ARL10Q8N8L6 244 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 TMC1Q8TDI8 760 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 UROC1Q96N76 676 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 SELENOOQ9BVL4 669 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 TMX1Q9H3N1 280 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 SH3GLB2Q9NR46 395 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 HOMER2Q9NSB8 354 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 TPCN1Q9ULQ1 816 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 AKNAQ7Z591 1439 aa6.93□□□□□ -1.3
HMGN2P47-201ENST00000559378 MYO15BQ96JP2 1530 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 FOXN3O00409 490 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PER1O15534 1290 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 CDKL5O76039 1030 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 NOP2P46087 812 aaKnown RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 COPAP53621 1224 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 UBASH3AP57075 661 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 RBM6P78332 1123 aaKnown RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 NUCB1Q02818 461 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 SMC1AQ14683 1233 aaKnown RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 MYBPC3Q14896 1274 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PDCD2Q16342 344 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PKN1Q16512 942 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 FAAH2Q6GMR7 532 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 GIGYF2Q6Y7W6 1299 aaKnown RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 CCDC91Q7Z6B0 441 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 RASSF3Q86WH2 238 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 ANKRD18AQ8IVF6 992 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 HDAC7Q8WUI4 952 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 MAML1Q92585 1016 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 SKA1Q96BD8 255 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 SLC39A3Q9BRY0 314 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 NACA2Q9H009 215 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 VPS33BQ9H267 617 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PRKRIP1Q9H875 184 aaPredicted RBP6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 CALCOCO1Q9P1Z2 691 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 GTF2A1LQ9UNN4 478 aa6.92□□□□□ -1.3
HMGN2P47-201ENST00000559378 PALM3A6NDB9 673 aaPredicted RBP6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 hCG_1984214I3L0E3 225 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 MYCLP1P12525 358 aaPredicted RBP6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 PRPHP41219 470 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 SEC13P55735 322 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 BPIFB3P59826 476 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 CBLBQ13191 982 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 PREPLQ4J6C6 727 aaPredicted RBP6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 MCTP2Q6DN12 878 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 PPP4R3AQ6IN85 833 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 IRGCQ6NXR0 463 aa6.91□□□□□ -1.3
HMGN2P47-201ENST00000559378 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms