RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SRCIN1Q9C0H9 1055 aa17.65■□□□□ 0.42
CASC4-208ENST00000559151 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
CASC4-208ENST00000559151 USP35Q9P2H5 1018 aa17.65■□□□□ 0.42
CASC4-208ENST00000559151 PSAPP07602 524 aa17.64■□□□□ 0.41
CASC4-208ENST00000559151 FGFR3P22607 806 aa17.64■□□□□ 0.41
CASC4-208ENST00000559151 EHD4Q9H223 541 aa17.64■□□□□ 0.41
CASC4-208ENST00000559151 GPR25O00155 361 aa17.62■□□□□ 0.41
CASC4-208ENST00000559151 EFCC1Q9HA90 598 aa17.62■□□□□ 0.41
CASC4-208ENST00000559151 CDC14CA4D256 554 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 MAP3K6O95382 1288 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 ACPPP15309 386 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 SOX18P35713 384 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 NAALADL2Q58DX5 795 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
CASC4-208ENST00000559151 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 PHF24Q9UPV7 400 aa17.61■□□□□ 0.41
CASC4-208ENST00000559151 KIF4AO95239 1232 aa17.6■□□□□ 0.41
CASC4-208ENST00000559151 NCAPG2Q86XI2 1143 aa17.6■□□□□ 0.41
CASC4-208ENST00000559151 USP31Q70CQ4 1352 aa17.6■□□□□ 0.41
CASC4-208ENST00000559151 CTBSQ01459 385 aa17.59■□□□□ 0.41
CASC4-208ENST00000559151 PLAURQ03405 335 aa17.59■□□□□ 0.41
CASC4-208ENST00000559151 HYAL2Q12891 473 aa17.59■□□□□ 0.41
CASC4-208ENST00000559151 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
CASC4-208ENST00000559151 NSUN5Q96P11 429 aaKnown RBP17.59■□□□□ 0.41
CASC4-208ENST00000559151 TAF1CQ15572 869 aaPredicted RBP17.58■□□□□ 0.4
CASC4-208ENST00000559151 CNTNAP3BQ96NU0 1288 aa17.58■□□□□ 0.4
CASC4-208ENST00000559151 TRERF1Q96PN7 1200 aa17.58■□□□□ 0.4
CASC4-208ENST00000559151 CNTNAP3Q9BZ76 1288 aa17.58■□□□□ 0.4
CASC4-208ENST00000559151 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.4
CASC4-208ENST00000559151 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
CASC4-208ENST00000559151 VWA5B2Q8N398 1253 aa17.57■□□□□ 0.4
CASC4-208ENST00000559151 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
CASC4-208ENST00000559151 GSTT1P30711 240 aa17.56■□□□□ 0.4
CASC4-208ENST00000559151 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
CASC4-208ENST00000559151 TGIF2Q9GZN2 237 aa17.56■□□□□ 0.4
CASC4-208ENST00000559151 LIN7BQ9HAP6 207 aa17.56■□□□□ 0.4
CASC4-208ENST00000559151 OSMRQ99650 979 aa17.55■□□□□ 0.4
CASC4-208ENST00000559151 TRPA1O75762 1119 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 ST13P50502 369 aaKnown RBP17.54■□□□□ 0.4
CASC4-208ENST00000559151 FCGRTP55899 365 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
CASC4-208ENST00000559151 FOXR1Q6PIV2 292 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 C3orf58Q8NDZ4 430 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 CCSER2Q9H7U1 834 aa17.54■□□□□ 0.4
CASC4-208ENST00000559151 NRLP54845 237 aa17.53■□□□□ 0.4
CASC4-208ENST00000559151 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
CASC4-208ENST00000559151 TCF12Q99081 682 aa17.53■□□□□ 0.4
CASC4-208ENST00000559151 ABCB6Q9NP58 842 aa17.53■□□□□ 0.4
CASC4-208ENST00000559151 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
CASC4-208ENST00000559151 LCE2BO14633 110 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 MLLT1Q03111 559 aaPredicted RBP17.52■□□□□ 0.4
CASC4-208ENST00000559151 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.4
CASC4-208ENST00000559151 SV2AQ7L0J3 742 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 HS2ST1Q7LGA3 356 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 CEP120Q8N960 986 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 OXCT2Q9BYC2 517 aaPredicted RBP17.52■□□□□ 0.4
CASC4-208ENST00000559151 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 PCDHGB7Q9Y5F8 929 aa17.52■□□□□ 0.4
CASC4-208ENST00000559151 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
CASC4-208ENST00000559151 Q6ZNB5 142 aa17.51■□□□□ 0.39
CASC4-208ENST00000559151 ACBD3Q9H3P7 528 aa17.51■□□□□ 0.39
CASC4-208ENST00000559151 IGFLR1Q9H665 355 aa17.51■□□□□ 0.39
CASC4-208ENST00000559151 GGT7Q9UJ14 662 aa17.51■□□□□ 0.39
CASC4-208ENST00000559151 TTF2Q9UNY4 1162 aaKnown RBP17.51■□□□□ 0.39
CASC4-208ENST00000559151 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.51■□□□□ 0.39
CASC4-208ENST00000559151 TMEM238LA0A1B0GVL6 79 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 POTECB2RU33 542 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 GPLD1P80108 840 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 HFE2Q6ZVN8 426 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 SYT9Q86SS6 491 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 CCNJLQ8IV13 435 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 SREK1Q8WXA9 508 aaKnown RBP17.49■□□□□ 0.39
CASC4-208ENST00000559151 HHIPQ96QV1 700 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 DZANK1Q9NVP4 752 aa17.49■□□□□ 0.39
CASC4-208ENST00000559151 J3QW42 95 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 C2CD2LO14523 706 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 TBC1D8BQ0IIM8 1120 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 SPACA7Q96KW9 195 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 TINF2Q9BSI4 451 aa17.48■□□□□ 0.39
CASC4-208ENST00000559151 RACK1P63244 317 aaKnown RBP17.47■□□□□ 0.39
CASC4-208ENST00000559151 NANOS1Q8WY41 292 aaKnown RBP17.47■□□□□ 0.39
CASC4-208ENST00000559151 UBE2OQ9C0C9 1292 aaKnown RBP17.47■□□□□ 0.39
CASC4-208ENST00000559151 DDX41Q9UJV9 622 aaKnown RBP17.47■□□□□ 0.39
CASC4-208ENST00000559151 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
CASC4-208ENST00000559151 BMP4P12644 408 aa17.46■□□□□ 0.39
CASC4-208ENST00000559151 SIK1P57059 783 aa17.46■□□□□ 0.39
CASC4-208ENST00000559151 ZNF468Q5VIY5 522 aaPredicted RBP17.46■□□□□ 0.39
CASC4-208ENST00000559151 DTHD1Q6ZMT9 781 aa17.46■□□□□ 0.39
CASC4-208ENST00000559151 DNAJB12Q9NXW2 375 aaKnown RBP17.46■□□□□ 0.39
CASC4-208ENST00000559151 AKAP2Q9Y2D5 859 aa17.46■□□□□ 0.39
CASC4-208ENST00000559151 METTL12A8MUP2 240 aa17.45■□□□□ 0.38
CASC4-208ENST00000559151 NFKBIEO00221 500 aa17.45■□□□□ 0.38
CASC4-208ENST00000559151 CAPN10Q9HC96 672 aa17.45■□□□□ 0.38
CASC4-208ENST00000559151 GRIA4P48058 902 aa17.44■□□□□ 0.38
CASC4-208ENST00000559151 TNNI2P48788 182 aa17.44■□□□□ 0.38
CASC4-208ENST00000559151 ATP11AP98196 1134 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms