RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CITED4Q96RK1 184 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 FAM129BQ96TA1 746 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 GGNBP2Q9H3C7 697 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-209ENST00000558861 KDM6BO15054 1643 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 CFAP74Q9C0B2 1584 aa9.16□□□□□ -0.94
LRRC28-209ENST00000558861 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-209ENST00000558861 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
LRRC28-209ENST00000558861 H7C1W4 665 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 EFSO43281 561 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 RAPGEF3O95398 923 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 FAM157BP0CG42 384 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 FIGNL1Q6PIW4 674 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 CMTR1Q8N1G2 835 aaKnown RBP9.15□□□□□ -0.94
LRRC28-209ENST00000558861 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
LRRC28-209ENST00000558861 KDM5CP41229 1560 aa9.15□□□□□ -0.95
LRRC28-209ENST00000558861 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.95
LRRC28-209ENST00000558861 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 ITSN2Q9NZM3 1697 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
LRRC28-209ENST00000558861 PCSK2P16519 638 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 ERCC3P19447 782 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 USP5P45974 858 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 GTPBP3Q969Y2 492 aaKnown RBP9.14□□□□□ -0.95
LRRC28-209ENST00000558861 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 HCN2Q9UL51 889 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 CAMSAP2Q08AD1 1489 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
LRRC28-209ENST00000558861 CDC14CA4D256 554 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 TREHO43280 583 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 BNIP3LO60238 219 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 EPB42P16452 691 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 SFSWAPQ12872 951 aaKnown RBP9.13□□□□□ -0.95
LRRC28-209ENST00000558861 PDE3BQ13370 1112 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 NDFIP2Q9NV92 336 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
LRRC28-209ENST00000558861 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
LRRC28-209ENST00000558861 TNP2Q05952 138 aa9.12□□□□□ -0.95
LRRC28-209ENST00000558861 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
LRRC28-209ENST00000558861 DMRTB1Q96MA1 342 aa9.12□□□□□ -0.95
LRRC28-209ENST00000558861 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
LRRC28-209ENST00000558861 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 GPR25O00155 361 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
LRRC28-209ENST00000558861 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRRC28-209ENST00000558861 DSC3Q14574 896 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 KCNH4Q9UQ05 1017 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
LRRC28-209ENST00000558861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRRC28-209ENST00000558861 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 XYLBO75191 536 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 CD33P20138 364 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 VEGFBP49765 207 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 KCNQ4P56696 695 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
LRRC28-209ENST00000558861 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 GMCL1Q96IK5 515 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 NIF3L1Q9GZT8 377 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 ABCC5O15440 1437 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 YEATS2Q9ULM3 1422 aa9.1□□□□□ -0.95
LRRC28-209ENST00000558861 PTPN23Q9H3S7 1636 aa9.09□□□□□ -0.95
LRRC28-209ENST00000558861 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
LRRC28-209ENST00000558861 RPLP1P05386 114 aaKnown RBP9.09□□□□□ -0.95
LRRC28-209ENST00000558861 EHHADHQ08426 723 aa9.09□□□□□ -0.95
LRRC28-209ENST00000558861 FBXO33Q7Z6M2 555 aa9.09□□□□□ -0.95
LRRC28-209ENST00000558861 ALKBH8Q96BT7 664 aaKnown RBP9.09□□□□□ -0.95
LRRC28-209ENST00000558861 ARHGEF40Q8TER5 1519 aa9.09□□□□□ -0.95
LRRC28-209ENST00000558861 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-209ENST00000558861 PTPRKQ15262 1439 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 MAPK8P45983 427 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 TAGLNQ01995 201 aaKnown RBP9.08□□□□□ -0.96
LRRC28-209ENST00000558861 ORC1Q13415 861 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 ZNF438Q7Z4V0 828 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-209ENST00000558861 ATXN7L1Q9ULK2 861 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-209ENST00000558861 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
LRRC28-209ENST00000558861 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 ZFYVE16Q7Z3T8 1539 aa9.08□□□□□ -0.96
LRRC28-209ENST00000558861 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 KIDINS220Q9ULH0 1771 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
LRRC28-209ENST00000558861 KRT25Q7Z3Z0 450 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 MARK1Q9P0L2 795 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 SHANK2Q9UPX8 1470 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
LRRC28-209ENST00000558861 DAPK1P53355 1430 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms