RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SPTBN5Q9NRC6 3674 aaKnown RBP15.89■□□□□ 0.13
SMAD3-206ENST00000558739 CAP1Q01518 475 aa15.88■□□□□ 0.13
SMAD3-206ENST00000558739 RTF1Q92541 710 aaKnown RBP15.88■□□□□ 0.13
SMAD3-206ENST00000558739 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
SMAD3-206ENST00000558739 PSME4Q14997 1843 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 H0YGN5 161 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 FKBP1BP68106 108 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 GPSM2P81274 684 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
SMAD3-206ENST00000558739 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
SMAD3-206ENST00000558739 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
SMAD3-206ENST00000558739 ANXA1P04083 346 aa15.86■□□□□ 0.13
SMAD3-206ENST00000558739 EIF4G2P78344 907 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMAD3-206ENST00000558739 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
SMAD3-206ENST00000558739 SLC17A8Q8NDX2 589 aa15.86■□□□□ 0.13
SMAD3-206ENST00000558739 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
SMAD3-206ENST00000558739 CFHR5Q9BXR6 569 aa15.86■□□□□ 0.13
SMAD3-206ENST00000558739 NSFL1CQ9UNZ2 370 aaKnown RBP15.86■□□□□ 0.13
SMAD3-206ENST00000558739 ZNF609O15014 1411 aa15.85■□□□□ 0.13
SMAD3-206ENST00000558739 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
SMAD3-206ENST00000558739 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-206ENST00000558739 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
SMAD3-206ENST00000558739 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-206ENST00000558739 VIL1P09327 827 aaKnown RBP15.84■□□□□ 0.13
SMAD3-206ENST00000558739 TTLL12Q14166 644 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-206ENST00000558739 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-206ENST00000558739 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
SMAD3-206ENST00000558739 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
SMAD3-206ENST00000558739 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
SMAD3-206ENST00000558739 EIF4A1P60842 406 aaKnown RBP15.83■□□□□ 0.12
SMAD3-206ENST00000558739 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
SMAD3-206ENST00000558739 ARMC5Q96C12 935 aa15.83■□□□□ 0.12
SMAD3-206ENST00000558739 ZNF646O15015 1829 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-206ENST00000558739 PTPN12Q05209 780 aaKnown RBP15.82■□□□□ 0.12
SMAD3-206ENST00000558739 SREBF2Q12772 1141 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 PRKG1Q13976 671 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 PDIA6Q15084 440 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 TBC1D16Q8TBP0 767 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 CD99L2Q8TCZ2 262 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 RBM27Q9P2N5 1060 aaKnown RBP15.82■□□□□ 0.12
SMAD3-206ENST00000558739 PTPN22Q9Y2R2 807 aa15.82■□□□□ 0.12
SMAD3-206ENST00000558739 LAMA2P24043 3122 aaKnown RBP15.82■□□□□ 0.12
SMAD3-206ENST00000558739 EYSQ5T1H1 3165 aa15.81■□□□□ 0.12
SMAD3-206ENST00000558739 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
SMAD3-206ENST00000558739 PITPNM2Q9BZ72 1349 aa15.81■□□□□ 0.12
SMAD3-206ENST00000558739 MYOZ2Q9NPC6 264 aa15.81■□□□□ 0.12
SMAD3-206ENST00000558739 LAMB1P07942 1786 aa15.8■□□□□ 0.12
SMAD3-206ENST00000558739 IGF2BP3O00425 579 aaKnown RBP eCLIP15.8■□□□□ 0.12
SMAD3-206ENST00000558739 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-206ENST00000558739 GMLQ99445 158 aa15.8■□□□□ 0.12
SMAD3-206ENST00000558739 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-206ENST00000558739 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
SMAD3-206ENST00000558739 SH3TC1Q8TE82 1336 aa15.79■□□□□ 0.12
SMAD3-206ENST00000558739 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
SMAD3-206ENST00000558739 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
SMAD3-206ENST00000558739 ZNF333Q96JL9 665 aa15.79■□□□□ 0.12
SMAD3-206ENST00000558739 TTC28Q96AY4 2481 aa15.79■□□□□ 0.12
SMAD3-206ENST00000558739 ZSWIM8A7E2V4 1837 aa15.79■□□□□ 0.12
SMAD3-206ENST00000558739 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-206ENST00000558739 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMAD3-206ENST00000558739 TMC4Q7Z404 712 aa15.78■□□□□ 0.12
SMAD3-206ENST00000558739 MXD3Q9BW11 206 aa15.78■□□□□ 0.12
SMAD3-206ENST00000558739 USP17L8P0C7I0 530 aa15.77■□□□□ 0.12
SMAD3-206ENST00000558739 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
SMAD3-206ENST00000558739 SSC5DA1L4H1 1573 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
SMAD3-206ENST00000558739 UFL1O94874 794 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 CRHR2Q13324 411 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 AGBL3Q8NEM8 1001 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 CLMNQ96JQ2 1002 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 EYA3Q99504 573 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 PRUNE2Q8WUY3 3088 aa15.76■□□□□ 0.11
SMAD3-206ENST00000558739 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
SMAD3-206ENST00000558739 SASH1O94885 1247 aa15.75■□□□□ 0.11
SMAD3-206ENST00000558739 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
SMAD3-206ENST00000558739 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
SMAD3-206ENST00000558739 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-206ENST00000558739 EFCC1Q9HA90 598 aa15.75■□□□□ 0.11
SMAD3-206ENST00000558739 WTIPA6NIX2 430 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-206ENST00000558739 SOX1O00570 391 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-206ENST00000558739 TCIRG1Q13488 830 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 LDLRAD1Q5T700 205 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 XAGE3Q8WTP9 111 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 ERO1AQ96HE7 468 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 TMEM106CQ9BVX2 250 aa15.74■□□□□ 0.11
SMAD3-206ENST00000558739 WNT10BO00744 389 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 ALDH1A1P00352 501 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 COPS6Q7L5N1 327 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 ZC3H12CQ9C0D7 883 aaKnown RBP15.73■□□□□ 0.11
SMAD3-206ENST00000558739 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 ANGEL1Q9UNK9 670 aaKnown RBP15.73■□□□□ 0.11
SMAD3-206ENST00000558739 PTCH2Q9Y6C5 1203 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 MUC3AQ02505 3323 aa15.73■□□□□ 0.11
SMAD3-206ENST00000558739 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
SMAD3-206ENST00000558739 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
SMAD3-206ENST00000558739 OTOFQ9HC10 1997 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 MANSC4A6NHS7 340 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms