RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 HSPA4P34932 840 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 ZAP70P43403 619 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 CCDC83Q8IWF9 413 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 AHDC1Q5TGY3 1603 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 SCARF1Q14162 830 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 AK2P54819 239 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 JAG2Q9Y219 1238 aa12.94□□□□□ -0.34
CSPG4P5-201ENST00000558731 COL15A1P39059 1388 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 CHST3Q7LGC8 479 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 TOMM22Q9NS69 142 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 HAUS7Q99871 368 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 TAF6LQ9Y6J9 622 aa12.93□□□□□ -0.34
CSPG4P5-201ENST00000558731 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 FAM196AQ6ZSG2 479 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 PHKA1P46020 1223 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 MCMDC2Q4G0Z9 681 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 COL16A1Q07092 1604 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
CSPG4P5-201ENST00000558731 VPS37CA5D8V6 355 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 KDM4AO75164 1064 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 FAM43AQ8N2R8 423 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 SLC27A2O14975 620 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 TRAK2O60296 914 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 ANAPC15P60006 121 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 SLC9C2Q5TAH2 1124 aa12.91□□□□□ -0.34
CSPG4P5-201ENST00000558731 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 PARP10Q53GL7 1025 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 SLC5A1P13866 664 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 ADAMTS7Q9UKP4 1686 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 PDE8BO95263 885 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 COL9A3Q14050 684 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
CSPG4P5-201ENST00000558731 CIAO1O76071 339 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 MCM2P49736 904 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 BCAMP50895 628 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 NUCB2P80303 420 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 TRAPPC3LQ5T215 181 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 SLIT2O94813 1529 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 EP400Q96L91 3159 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 CSF1RP07333 972 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 PSMA5P28066 241 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 CCDC102BQ68D86 513 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 LRP2BPQ9P2M1 347 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 CDC5LQ99459 802 aaKnown RBP12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 ARFGEF2Q9Y6D5 1785 aa12.89□□□□□ -0.35
CSPG4P5-201ENST00000558731 DDX11L8A8MPP1 907 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 LARGE1O95461 756 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 MCAMP43121 646 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 PUM3Q15397 648 aaKnown RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 GYG1P46976 350 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P5-201ENST00000558731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 CHRNDQ07001 517 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 OSBP2Q969R2 916 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms