RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 MPHOSPH9Q99550 1183 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 KLK14Q9P0G3 267 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 LRFN2Q9ULH4 789 aa6.32□□□□□ -1.4
SPG11-211ENST00000558561 UNC13BO14795 1591 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 EFCAB6Q5THR3 1501 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 FAM135AQ9P2D6 1515 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 ZC3H13Q5T200 1668 aaKnown RBP6.31□□□□□ -1.4
SPG11-211ENST00000558561 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
SPG11-211ENST00000558561 RTN1Q16799 776 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 LRRC69Q6ZNQ3 347 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 TRIM22Q8IYM9 498 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 ZNF280CQ8ND82 737 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 COL26A1Q96A83 441 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 CRISPLD1Q9H336 500 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
SPG11-211ENST00000558561 SLC52A1Q9NWF4 448 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 NPHP4O75161 1426 aaPredicted RBP6.31□□□□□ -1.4
SPG11-211ENST00000558561 TMEM2Q9UHN6 1383 aa6.31□□□□□ -1.4
SPG11-211ENST00000558561 TET3O43151 1660 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 NLRP1Q9C000 1473 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 IQGAP3Q86VI3 1631 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 CDC14CA4D256 554 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 H3BM21 787 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 PTCD1O75127 700 aaKnown RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 BRD1O95696 1058 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 DGKZQ13574 1117 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 B4GALNT3Q6L9W6 998 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 C16orf46Q6P387 395 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 GTF3C2Q8WUA4 911 aaPredicted RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 GTPBP3Q969Y2 492 aaKnown RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 ZNF775Q96BV0 537 aaPredicted RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 ZNF837Q96EG3 531 aaPredicted RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 HSH2DQ96JZ2 352 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 NUCKS1Q9H1E3 243 aaKnown RBP6.3□□□□□ -1.4
SPG11-211ENST00000558561 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
SPG11-211ENST00000558561 ARHGAP23Q9P227 1491 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 TMEM131LA2VDJ0 1609 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 HFM1A2PYH4 1435 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 H7C1W4 665 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 POLR1AO95602 1720 aaPredicted RBP6.29□□□□□ -1.4
SPG11-211ENST00000558561 ARID4AP29374 1257 aaPredicted RBP6.29□□□□□ -1.4
SPG11-211ENST00000558561 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
SPG11-211ENST00000558561 EFHC2Q5JST6 749 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 GPR161Q8N6U8 529 aaKnown RBP6.29□□□□□ -1.4
SPG11-211ENST00000558561 MYO19Q96H55 970 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
SPG11-211ENST00000558561 NEUROD4Q9HD90 331 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 GCC2Q8IWJ2 1684 aa6.29□□□□□ -1.4
SPG11-211ENST00000558561 MED14O60244 1454 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 ERBB4Q15303 1308 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 SETD5Q9C0A6 1442 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 RIMS2Q9UQ26 1411 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 UBAP1LF5GYI3 381 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 GPR25O00155 361 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 TNFRSF10BO14763 440 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 SERPINB4P48594 390 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 PIP4K2BP78356 416 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 MTMR3Q13615 1198 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 ZNF326Q5BKZ1 582 aaKnown RBP6.28□□□□□ -1.4
SPG11-211ENST00000558561 FAM26DQ5JW98 314 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 NLRP8Q86W28 1048 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 AEBP1Q8IUX7 1158 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 NPAS3Q8IXF0 933 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 NANOS1Q8WY41 292 aaKnown RBP6.28□□□□□ -1.4
SPG11-211ENST00000558561 IFT43Q96FT9 208 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 ANO2Q9NQ90 1003 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 EID1Q9Y6B2 187 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
SPG11-211ENST00000558561 RAB3GAP2Q9H2M9 1393 aa6.28□□□□□ -1.4
SPG11-211ENST00000558561 XIRP1Q702N8 1843 aaKnown RBP6.27□□□□□ -1.41
SPG11-211ENST00000558561 ZFYVE9O95405 1425 aa6.27□□□□□ -1.41
SPG11-211ENST00000558561 SLIT1O75093 1534 aa6.27□□□□□ -1.41
SPG11-211ENST00000558561 ABL1P00519 1130 aa6.27□□□□□ -1.41
SPG11-211ENST00000558561 NFX1Q12986 1120 aaKnown RBP6.27□□□□□ -1.41
SPG11-211ENST00000558561 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
SPG11-211ENST00000558561 CLTCL1P53675 1640 aa6.27□□□□□ -1.41
SPG11-211ENST00000558561 SCAF11Q99590 1463 aaKnown RBP6.27□□□□□ -1.41
SPG11-211ENST00000558561 IQGAP1P46940 1657 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 PTPRUQ92729 1446 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ALKQ9UM73 1620 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ZBTB39O15060 712 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
SPG11-211ENST00000558561 BNIP3LO60238 219 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 KCNA6P17658 529 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
SPG11-211ENST00000558561 LBRQ14739 615 aaKnown RBP6.26□□□□□ -1.41
SPG11-211ENST00000558561 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 SLC16A10Q8TF71 515 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 GMCL1Q96IK5 515 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ANKIB1Q9P2G1 1089 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 DMGDHQ9UI17 866 aaKnown RBP6.26□□□□□ -1.41
SPG11-211ENST00000558561 HCN2Q9UL51 889 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 PCDHGC4Q9Y5F7 938 aa6.26□□□□□ -1.41
SPG11-211ENST00000558561 ADGRF5Q8IZF2 1346 aa6.25□□□□□ -1.41
SPG11-211ENST00000558561 ADAMTS13Q76LX8 1427 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms