RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 KDRP35968 1356 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 C17orf50Q8WW18 174 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 KCNN1Q92952 543 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 CARD6Q9BX69 1037 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 CBX8Q9HC52 389 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 IBSPP21815 317 aaPredicted RBP12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 FILIP1LQ4L180 1135 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 KIAA0825Q8IV33 1275 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 NME8Q8N427 588 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 MAPK8IP1Q9UQF2 711 aa12.7□□□□□ -0.38
SEMA4B-204ENST00000558065 CCT5P48643 541 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 KIAA1328Q86T90 577 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 AHCYL1O43865 530 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 PHACTR1Q9C0D0 580 aa12.69□□□□□ -0.38
SEMA4B-204ENST00000558065 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 SCNN1BP51168 640 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 CUL4AQ13619 759 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 KLC4Q9NSK0 619 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 ATXN2Q99700 1313 aaKnown RBP12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 RASSF9O75901 435 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 ACBD5Q5T8D3 534 aaPredicted RBP12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 MFN1Q8IWA4 741 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 FAM71BQ8TC56 605 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
SEMA4B-204ENST00000558065 SHOX2O60902 331 aaPredicted RBP12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 CDC45O75419 566 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 SYT1P21579 422 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 EBAG9O00559 213 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 ATP6V1G1O75348 118 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 GNAI3P08754 354 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 RRP12Q5JTH9 1297 aaKnown RBP12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 ARHGAP22Q7Z5H3 698 aa12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
SEMA4B-204ENST00000558065 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 TYRO3Q06418 890 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 CEP85LQ5SZL2 805 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 ELOA2Q8IYF1 753 aaPredicted RBP12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 HNRNPLLQ8WVV9 542 aaKnown RBP12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 NUP155O75694 1391 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 SMAPO00193 183 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 RHBDL3P58872 404 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 DBN1Q16643 649 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 CEP112Q8N8E3 955 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 CWC25Q9NXE8 425 aaPredicted RBP12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
SEMA4B-204ENST00000558065 RNF8O76064 485 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 MPP3Q13368 585 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 SLC30A9Q6PML9 568 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.38
SEMA4B-204ENST00000558065 OPA1O60313 960 aa12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 TUBB4AP04350 444 aa12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 EIF4BP23588 611 aaKnown RBP12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 ETF1P62495 437 aaKnown RBP12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 RBM41Q96IZ5 413 aaKnown RBP12.65□□□□□ -0.39
SEMA4B-204ENST00000558065 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 CYP27B1O15528 508 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 BRD3Q15059 726 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 TRIM65Q6PJ69 517 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms