RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 GGA1Q9UJY5 639 aa17.46■□□□□ 0.39
SNRPA1-204ENST00000558020 LRRC37AA6NMS7 1700 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 PSMD14O00487 310 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 ECE2O60344 883 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 DOK7Q18PE1 504 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
SNRPA1-204ENST00000558020 UFL1O94874 794 aa17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 CELF2O95319 508 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 GPR101Q96P66 508 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 TLL2Q9Y6L7 1015 aa17.44■□□□□ 0.38
SNRPA1-204ENST00000558020 CAPN15O75808 1086 aa17.43■□□□□ 0.38
SNRPA1-204ENST00000558020 HIRAP54198 1017 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-204ENST00000558020 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNRPA1-204ENST00000558020 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-204ENST00000558020 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-204ENST00000558020 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 MAP2K2P36507 400 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 GRM1Q13255 1194 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 XDHP47989 1333 aa17.42■□□□□ 0.38
SNRPA1-204ENST00000558020 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 IGKV5-2P06315 115 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 VIL1P09327 827 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 CTSWP56202 376 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 ZNF408Q9H9D4 720 aa17.41■□□□□ 0.38
SNRPA1-204ENST00000558020 LBX1P52954 281 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 CYP4F22Q6NT55 531 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 USP48Q86UV5 1035 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
SNRPA1-204ENST00000558020 NEURL1BA8MQ27 555 aa17.39■□□□□ 0.37
SNRPA1-204ENST00000558020 KRT26Q7Z3Y9 468 aa17.39■□□□□ 0.37
SNRPA1-204ENST00000558020 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
SNRPA1-204ENST00000558020 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-204ENST00000558020 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 H7C1W4 665 aa17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 FLIIQ13045 1269 aa17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 CWF19L2Q2TBE0 894 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
SNRPA1-204ENST00000558020 CA12O43570 354 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 G2E3Q7L622 706 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 C2orf69Q8N8R5 385 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 GREM2Q9H772 168 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
SNRPA1-204ENST00000558020 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 GCKRQ14397 625 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 RSBN1LQ6PCB5 846 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
SNRPA1-204ENST00000558020 VAMP4O75379 141 aa17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
SNRPA1-204ENST00000558020 HUNKP57058 714 aa17.34■□□□□ 0.37
SNRPA1-204ENST00000558020 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-204ENST00000558020 NOGQ13253 232 aa17.34■□□□□ 0.37
SNRPA1-204ENST00000558020 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
SNRPA1-204ENST00000558020 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
SNRPA1-204ENST00000558020 COL4A1P02462 1669 aa17.33■□□□□ 0.37
SNRPA1-204ENST00000558020 AOC2O75106 756 aa17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 EGFRP00533 1210 aa17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 MMP14P50281 582 aa17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 BRPF1P55201 1214 aaPredicted RBP17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 CCDC102AQ96A19 550 aa17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 CACNA1FO60840 1977 aa17.33■□□□□ 0.36
SNRPA1-204ENST00000558020 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
SNRPA1-204ENST00000558020 ITGA6P23229 1130 aa17.32■□□□□ 0.36
SNRPA1-204ENST00000558020 SCARF1Q14162 830 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms