RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 EDEM1Q92611 657 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 MYO19Q96H55 970 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 TINF2Q9BSI4 451 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 TGIF2Q9GZN2 237 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 TNS2Q63HR2 1409 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 SPATA31A6Q5VVP1 1343 aa7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 ABCA10Q8WWZ4 1543 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 CDK2AP1O14519 115 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 MZF1P28698 734 aaPredicted RBP7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 TLR1Q15399 786 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 PRICKLE2Q7Z3G6 844 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 GJD3Q8N144 294 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 DNAJC2Q99543 621 aaKnown RBP7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 ACBD3Q9H3P7 528 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 C3P01024 1663 aa7.24□□□□□ -1.25
MTHFD1-216ENST00000557539 ZFYVE16Q7Z3T8 1539 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 SERTM1A2A2V5 107 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 CDC14CA4D256 554 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 IL2RAP01589 272 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 USP5P45974 858 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 DGKZQ13574 1117 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 R3HDM1Q15032 1099 aaKnown RBP7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 SH3PXD2AQ5TCZ1 1133 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 DHX38Q92620 1227 aaKnown RBP7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 XAGE2Q96GT9 111 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 PRKAG2Q9UGJ0 569 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 ZNF232Q9UNY5 417 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 HCN4Q9Y3Q4 1203 aa7.23□□□□□ -1.25
MTHFD1-216ENST00000557539 PDGFAP04085 211 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 RHOQP17081 205 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 GNA15P30679 374 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 ZAP70P43403 619 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 C11orf91Q3C1V1 193 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 SV2AQ7L0J3 742 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 ALDH16A1Q8IZ83 802 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 SLC43A3Q8NBI5 491 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 CNKSR1Q969H4 720 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 KLK14Q9P0G3 267 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 NEO1Q92859 1461 aa7.22□□□□□ -1.25
MTHFD1-216ENST00000557539 NWD1Q149M9 1564 aa7.21□□□□□ -1.25
MTHFD1-216ENST00000557539 VWDEQ8N2E2 1590 aa7.21□□□□□ -1.25
MTHFD1-216ENST00000557539 MEN1O00255 615 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 EML1O00423 815 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 PPM1GO15355 546 aaPredicted RBP7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 ATP2B1P20020 1258 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 TNNI2P48788 182 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 GNL2Q13823 731 aaKnown RBP7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 IFT43Q96FT9 208 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 CSRNP1Q96S65 589 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 CFHR5Q9BXR6 569 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 CABP1Q9NZU7 370 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 PARP3Q9Y6F1 533 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 CAMTA1Q9Y6Y1 1673 aa7.21□□□□□ -1.26
MTHFD1-216ENST00000557539 BLMP54132 1417 aaPredicted RBP7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 DENND4BO75064 1496 aaPredicted RBP7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 GPC1P35052 558 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 NOS2P35228 1153 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 GSK3AP49840 483 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 ORC1Q13415 861 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 TEAD4Q15561 434 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 RTN1Q16799 776 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 GIMAP6Q6P9H5 292 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 NBPF15Q8N660 670 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 WHAMMQ8TF30 809 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 ZDHHC1Q8WTX9 485 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 EFCAB5A4FU69 1503 aa7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 CDK13Q14004 1512 aaKnown RBP7.2□□□□□ -1.26
MTHFD1-216ENST00000557539 SLURP2P0DP57 97 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 PCSK2P16519 638 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 DNAJA1P31689 397 aaKnown RBP7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 GAS6Q14393 721 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 C8orf34Q49A92 452 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 GPR152Q8TDT2 470 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 FBF1Q8TES7 1133 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 L3MBTL2Q969R5 705 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 CRELD1Q96HD1 420 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 ESYT1Q9BSJ8 1104 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 PHACTR1Q9C0D0 580 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 GRIP2Q9C0E4 1043 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 LNPKQ9C0E8 428 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 NLRP2Q9NX02 1062 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
MTHFD1-216ENST00000557539 EIF1AYO14602 144 aaKnown RBP7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 CTSHP09668 335 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 HIRAP54198 1017 aaPredicted RBP7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 POU4F2Q12837 409 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 CLN3Q13286 438 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 NUDT16Q96DE0 195 aaKnown RBP7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 HRH3Q9Y5N1 445 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 SUPT6HQ7KZ85 1726 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms