RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ERC2O15083 957 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 MMP10P09238 476 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 SDSP20132 328 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 VGLL2Q8N8G2 317 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 AKAP2Q9Y2D5 859 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 DBNDD2Q9BQY9 259 aa17.71■□□□□ 0.43
ARHGEF40-208ENST00000557498 PARP3Q9Y6F1 533 aa17.71■□□□□ 0.43
ARHGEF40-208ENST00000557498 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 A0A1B0GUL7 405 aa17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 CDC45O75419 566 aa17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 ATP2B3Q16720 1220 aa17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 CRY2Q49AN0 593 aa17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-208ENST00000557498 PDE8BO95263 885 aa17.69■□□□□ 0.42
ARHGEF40-208ENST00000557498 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
ARHGEF40-208ENST00000557498 TIMM10P62072 90 aa17.68■□□□□ 0.42
ARHGEF40-208ENST00000557498 RPGRQ92834 1020 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-208ENST00000557498 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.427e-11■■□□□ 11.5
ARHGEF40-208ENST00000557498 BSDC1Q9NW68 430 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-208ENST00000557498 KLRG2A4D1S0 409 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 TRIM6-TRIM34B2RNG4 842 aa17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 ATP5JP18859 108 aa17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 GRAPQ13588 217 aa17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 BRIP1Q9BX63 1249 aa17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-208ENST00000557498 FGFR2P21802 821 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 ADORA1P30542 326 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 CHRNDQ07001 517 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 CNTROBQ8N137 903 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
ARHGEF40-208ENST00000557498 HOXA10P31260 410 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 HELBQ8NG08 1087 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 LPIN2Q92539 896 aa17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 BOLA2Q9H3K6 86 aa17.65■□□□□ 0.42
ARHGEF40-208ENST00000557498 TAF5LO75529 589 aa17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 SEC24BO95487 1268 aa17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 SLC5A1P13866 664 aa17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-208ENST00000557498 PDE6BP35913 854 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 CCDC158Q5M9N0 1113 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 CRAMP1Q96RY5 1269 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 HAUS7Q99871 368 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 LRRC37AA6NMS7 1700 aa17.63■□□□□ 0.41
ARHGEF40-208ENST00000557498 IFIT1P09914 478 aaKnown RBP17.62■□□□□ 0.41
ARHGEF40-208ENST00000557498 TTC39AQ5SRH9 613 aa17.62■□□□□ 0.41
ARHGEF40-208ENST00000557498 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
ARHGEF40-208ENST00000557498 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-208ENST00000557498 NPR1P16066 1061 aa17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 CHMLP26374 656 aa17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 MFAP1P55081 439 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
ARHGEF40-208ENST00000557498 RFX7Q2KHR2 1363 aa17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 SNAP23O00161 211 aa17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 BBOX1O75936 387 aa17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 SRGNP10124 158 aa17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-208ENST00000557498 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 AKAP11Q9UKA4 1901 aa17.58■□□□□ 0.4
ARHGEF40-208ENST00000557498 PPEF1O14829 653 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 PHKA1P46020 1223 aa17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 KCNJ4P48050 445 aa17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 EDC3Q96F86 508 aaKnown RBP17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 FSD1Q9BTV5 496 aa17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 NDUFB9Q9Y6M9 179 aa17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
ARHGEF40-208ENST00000557498 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 LTBP1Q14766 1721 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 XDHP47989 1333 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 HIP1O00291 1037 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 SCARF1Q14162 830 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 STYK1Q6J9G0 422 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 ESYT1Q9BSJ8 1104 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms