RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 A0A0A0MRY4 1105 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 RGS9O75916 674 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-243ENST00000556671 SASH3O75995 380 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 RARAP10276 462 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 FAM35AQ86V20 835 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 COL26A1Q96A83 441 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 FRRS1LQ9P0K9 344 aa7.61□□□□□ -1.19
ATXN3-243ENST00000556671 GPLD1P80108 840 aa7.6□□□□□ -1.19
ATXN3-243ENST00000556671 LPIN3Q9BQK8 851 aa7.6□□□□□ -1.19
ATXN3-243ENST00000556671 SAP130Q9H0E3 1048 aa7.6□□□□□ -1.19
ATXN3-243ENST00000556671 CXXC1Q9P0U4 656 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-243ENST00000556671 USP20Q9Y2K6 914 aa7.6□□□□□ -1.19
ATXN3-243ENST00000556671 PRG4Q92954 1404 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-243ENST00000556671 ERCC6L2Q5T890 1561 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 CPB1P15086 417 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 ELNP15502 786 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 GRIK5Q16478 980 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 TMEM164Q5U3C3 297 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 ETFBKMTQ8IXQ9 262 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 KCNMB2Q9Y691 235 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 RAPGEF2Q9Y4G8 1499 aa7.59□□□□□ -1.19
ATXN3-243ENST00000556671 C9orf172C9J069 976 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 XYLBO75191 536 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 SELPP16109 830 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 ITGB7P26010 798 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 NRLP54845 237 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 RAC1P63000 192 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 PERM1Q5SV97 790 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
ATXN3-243ENST00000556671 TTC9Q92623 222 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 NUP160Q12769 1436 aa7.58□□□□□ -1.2
ATXN3-243ENST00000556671 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 ADGRE1Q14246 886 aa7.57□□□□□ -1.2
ATXN3-243ENST00000556671 RSPO4Q2I0M5 234 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
ATXN3-243ENST00000556671 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
ATXN3-243ENST00000556671 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 FMR1NBQ8N0W7 255 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
ATXN3-243ENST00000556671 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 ARAP1Q96P48 1450 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 PTCD1O75127 700 aaKnown RBP7.56□□□□□ -1.2
ATXN3-243ENST00000556671 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-243ENST00000556671 PLAURQ03405 335 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 FAM26DQ5JW98 314 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 ELMSAN1Q6PJG2 1045 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 LENG1Q96BZ8 264 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-243ENST00000556671 CCDC97Q96F63 343 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-243ENST00000556671 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 SEMA6BQ9H3T3 888 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 SERPINA10Q9UK55 444 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 KIAA0586Q9BVV6 1533 aa7.56□□□□□ -1.2
ATXN3-243ENST00000556671 IQGAP2Q13576 1575 aa7.55□□□□□ -1.2
ATXN3-243ENST00000556671 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
ATXN3-243ENST00000556671 DTWD1Q8N5C7 304 aa7.55□□□□□ -1.2
ATXN3-243ENST00000556671 MMP20O60882 483 aa7.54□□□□□ -1.2
ATXN3-243ENST00000556671 PSAPP07602 524 aa7.54□□□□□ -1.2
ATXN3-243ENST00000556671 HOXD8P13378 290 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-243ENST00000556671 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-243ENST00000556671 TRIP4Q15650 581 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-243ENST00000556671 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
ATXN3-243ENST00000556671 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
ATXN3-243ENST00000556671 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
ATXN3-243ENST00000556671 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
ATXN3-243ENST00000556671 CARMIL2Q6F5E8 1435 aa7.53□□□□□ -1.2
ATXN3-243ENST00000556671 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
ATXN3-243ENST00000556671 SOX18P35713 384 aa7.53□□□□□ -1.2
ATXN3-243ENST00000556671 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-243ENST00000556671 TXNRD3Q86VQ6 643 aa7.53□□□□□ -1.2
ATXN3-243ENST00000556671 TSPOAP1O95153 1857 aa7.53□□□□□ -1.2
ATXN3-243ENST00000556671 EEA1Q15075 1411 aa7.52□□□□□ -1.2
ATXN3-243ENST00000556671 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 SIK1P57059 783 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 XP32Q5T750 250 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 FAM13BQ9NYF5 915 aa7.52□□□□□ -1.21
ATXN3-243ENST00000556671 J3QW42 95 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 DYRK3O43781 588 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 ZAP70P43403 619 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
ATXN3-243ENST00000556671 PTPRGP23470 1445 aa7.51□□□□□ -1.21
ATXN3-243ENST00000556671 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 Q8N3U1 123 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 STIM2Q9P246 746 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 USP21Q9UK80 565 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 GTF3C3Q9Y5Q9 886 aa7.5□□□□□ -1.21
ATXN3-243ENST00000556671 UBAP1LF5GYI3 381 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms