RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 LTBP4Q8N2S1 1624 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 NEURL4Q96JN8 1562 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 PIP4K2BP78356 416 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 PDE3BQ13370 1112 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 ESCO1Q5FWF5 840 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 GPAMQ9HCL2 828 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 TFIP11Q9UBB9 837 aaKnown RBP8.11□□□□□ -1.11
CPSF2-205ENST00000556622 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
CPSF2-205ENST00000556622 IQGAP1P46940 1657 aa8.11□□□□□ -1.11
CPSF2-205ENST00000556622 INSRP06213 1382 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 KIF7Q2M1P5 1343 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 FANCIQ9NVI1 1328 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 ADGRB3O60242 1522 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 PALM3A6NDB9 673 aaPredicted RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 GNB5O14775 395 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 ZBTB7BO15156 539 aaPredicted RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 INHAP05111 366 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 CENPCQ03188 943 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 UBAP2LQ14157 1087 aaKnown RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 MAFBQ9Y5Q3 323 aaPredicted RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 RALGAPBQ86X10 1494 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 KDM5AP29375 1690 aaKnown RBP8.1□□□□□ -1.11
CPSF2-205ENST00000556622 TMEM131LA2VDJ0 1609 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 MYO5BQ9ULV0 1848 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 USP47Q96K76 1375 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 PLEKHG1Q9ULL1 1385 aa8.1□□□□□ -1.11
CPSF2-205ENST00000556622 RPGRIP1LQ68CZ1 1315 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 TRIM50Q86XT4 487 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 CARD11Q9BXL7 1154 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 SPHKAPQ2M3C7 1700 aa8.09□□□□□ -1.11
CPSF2-205ENST00000556622 BRD4O60885 1362 aaPredicted RBP8.09□□□□□ -1.12
CPSF2-205ENST00000556622 DKK1O94907 266 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 GDF10P55107 478 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 TAS1R3Q7RTX0 852 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 C14orf37Q86TY3 774 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 FAM9BQ8IZU0 186 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 AMOTL2Q9Y2J4 779 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 ZFYVE9O95405 1425 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 SMG6Q86US8 1419 aaKnown RBP8.08□□□□□ -1.12
CPSF2-205ENST00000556622 CPS1P31327 1500 aa8.08□□□□□ -1.12
CPSF2-205ENST00000556622 CCDC144AA2RUR9 1427 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 DGKGP49619 791 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 GTF2IP78347 998 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 MTFR1Q15390 333 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 SLCO4C1Q6ZQN7 724 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 BTBD6Q96KE9 485 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 RBM19Q9Y4C8 960 aaKnown RBP8.07□□□□□ -1.12
CPSF2-205ENST00000556622 KIF1BO60333 1816 aa8.07□□□□□ -1.12
CPSF2-205ENST00000556622 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 BMP4P12644 408 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 ATP1A2P50993 1020 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 NBPF8Q3BBV2 869 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
CPSF2-205ENST00000556622 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
CPSF2-205ENST00000556622 MYBBP1AQ9BQG0 1328 aaKnown RBP8.05□□□□□ -1.12
CPSF2-205ENST00000556622 TRPM2O94759 1503 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 CLTCL1P53675 1640 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 M0R2N6 131 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 STAU1O95793 577 aaKnown RBP8.05□□□□□ -1.12
CPSF2-205ENST00000556622 PHKA2P46019 1235 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 SMTNP53814 917 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 CLDN10P78369 228 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 CTBSQ01459 385 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
CPSF2-205ENST00000556622 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 SIX5Q8N196 739 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 ABHD17AQ96GS6 310 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 PHF24Q9UPV7 400 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 NUDCQ9Y266 331 aa8.05□□□□□ -1.12
CPSF2-205ENST00000556622 LRRC7Q96NW7 1537 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 EPXP11678 715 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
CPSF2-205ENST00000556622 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 ZSCAN10Q96SZ4 725 aaPredicted RBP8.04□□□□□ -1.12
CPSF2-205ENST00000556622 TMEM94Q12767 1356 aa8.04□□□□□ -1.12
CPSF2-205ENST00000556622 ADAMTS13Q76LX8 1427 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms