RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CDC5LQ99459 802 aaKnown RBP13.22□□□□□ -0.29
LINC01550-206ENST00000556462 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 COL4A1P02462 1669 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 MSH5O43196 834 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
LINC01550-206ENST00000556462 BAG6P46379 1132 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
LINC01550-206ENST00000556462 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
LINC01550-206ENST00000556462 NPHP1O15259 732 aa13.21□□□□□ -0.29
LINC01550-206ENST00000556462 CHMLP26374 656 aa13.21□□□□□ -0.29
LINC01550-206ENST00000556462 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
LINC01550-206ENST00000556462 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
LINC01550-206ENST00000556462 ADORA1P30542 326 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
LINC01550-206ENST00000556462 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
LINC01550-206ENST00000556462 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
LINC01550-206ENST00000556462 FGFR2P21802 821 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 ATP2B3Q16720 1220 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
LINC01550-206ENST00000556462 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
LINC01550-206ENST00000556462 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 SNAP23O00161 211 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 TAF5LO75529 589 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 CHRNDQ07001 517 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 HAUS7Q99871 368 aa13.19□□□□□ -0.3
LINC01550-206ENST00000556462 ST5P78524 1137 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
LINC01550-206ENST00000556462 LPIN2Q92539 896 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 EDC3Q96F86 508 aaKnown RBP13.18□□□□□ -0.3
LINC01550-206ENST00000556462 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 C22orf23Q9BZE7 217 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
LINC01550-206ENST00000556462 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
LINC01550-206ENST00000556462 TAF1P21675 1872 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
LINC01550-206ENST00000556462 CCDC158Q5M9N0 1113 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
LINC01550-206ENST00000556462 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC01550-206ENST00000556462 IL25Q9H293 177 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 MMP10P09238 476 aa13.17□□□□□ -0.3
LINC01550-206ENST00000556462 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
LINC01550-206ENST00000556462 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
LINC01550-206ENST00000556462 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
LINC01550-206ENST00000556462 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
LINC01550-206ENST00000556462 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
LINC01550-206ENST00000556462 GRAPQ13588 217 aa13.15□□□□□ -0.3
LINC01550-206ENST00000556462 SCARF1Q14162 830 aa13.15□□□□□ -0.3
LINC01550-206ENST00000556462 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
LINC01550-206ENST00000556462 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
LINC01550-206ENST00000556462 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
LINC01550-206ENST00000556462 SGSM2O43147 1006 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 REC8O95072 547 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 SLC5A1P13866 664 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 PAG1Q9NWQ8 432 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 HOXA10P31260 410 aaPredicted RBP13.14□□□□□ -0.31
LINC01550-206ENST00000556462 PHKA1P46020 1223 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
LINC01550-206ENST00000556462 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 SPEF2Q9C093 1822 aa13.14□□□□□ -0.31
LINC01550-206ENST00000556462 GOLIM4O00461 696 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 MCAMP43121 646 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
LINC01550-206ENST00000556462 ANTXR1Q9H6X2 564 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 DIAPH3Q9NSV4 1193 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
LINC01550-206ENST00000556462 HIP1O00291 1037 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
LINC01550-206ENST00000556462 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 KIF2CQ99661 725 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 ZAP70P43403 619 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 BCAMP50895 628 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01550-206ENST00000556462 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
LINC01550-206ENST00000556462 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
LINC01550-206ENST00000556462 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 ANKRD2Q9GZV1 360 aa13.12□□□□□ -0.31
LINC01550-206ENST00000556462 CHGBP05060 677 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms