RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
ATXN3-239ENST00000556315 CYP2U1Q7Z449 544 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 TRAK1Q9UPV9 953 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 KIF1BO60333 1816 aa7.12□□□□□ -1.27
ATXN3-239ENST00000556315 SPATA31C2B4DYI2 1134 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 POU4F2Q12837 409 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 SUZ12Q15022 739 aaKnown RBP7.11□□□□□ -1.27
ATXN3-239ENST00000556315 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 NUDT16Q96DE0 195 aaKnown RBP7.11□□□□□ -1.27
ATXN3-239ENST00000556315 SCARF2Q96GP6 870 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-239ENST00000556315 OSBPL3Q9H4L5 887 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 MBIPQ9NS73 344 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 COG6Q9Y2V7 657 aa7.11□□□□□ -1.27
ATXN3-239ENST00000556315 FMN2Q9NZ56 1722 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 H7C1W4 665 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 IRS1P35568 1242 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 MARSP56192 900 aaKnown RBP7.1□□□□□ -1.27
ATXN3-239ENST00000556315 NBPF10Q6P3W6 841 aaKnown RBP7.1□□□□□ -1.27
ATXN3-239ENST00000556315 NBPF15Q8N660 670 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 NLRP3Q96P20 1036 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 ZNF330Q9Y3S2 320 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-239ENST00000556315 PCDHB11Q9Y5F2 797 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 DNMT3AQ9Y6K1 912 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-239ENST00000556315 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-239ENST00000556315 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 SLC27A3Q5K4L6 730 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 RIPOR1Q6ZS17 1223 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 FHDC1Q9C0D6 1143 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-239ENST00000556315 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-239ENST00000556315 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-239ENST00000556315 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-239ENST00000556315 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
ATXN3-239ENST00000556315 GPR25O00155 361 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 GCP02774 474 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 NLRP13Q86W25 1043 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 POM121Q96HA1 1249 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 ARHGEF10LQ9HCE6 1279 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 PPLO60437 1756 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-239ENST00000556315 ACEP12821 1306 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 GNRH1P01148 92 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 ABL2P42684 1182 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
ATXN3-239ENST00000556315 GAS2L1Q99501 681 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-239ENST00000556315 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-239ENST00000556315 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 ENAMQ9NRM1 1142 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 HRH3Q9Y5N1 445 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-239ENST00000556315 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 IGHA1P01876 353 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 F11P03951 625 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 ACDQ96AP0 544 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 ARXQ96QS3 562 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 ESYT1Q9BSJ8 1104 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 LRRC4BQ9NT99 713 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 CEP126Q9P2H0 1117 aa7.06□□□□□ -1.28
ATXN3-239ENST00000556315 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 IL2RAP01589 272 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 BCRP11274 1271 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 FOXK2Q01167 660 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 WASHC4Q2M389 1173 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-239ENST00000556315 CNKSR1Q969H4 720 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 CCDC85AQ96PX6 553 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-239ENST00000556315 TIMMDC1Q9NPL8 285 aa7.05□□□□□ -1.28
ATXN3-239ENST00000556315 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-239ENST00000556315 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-239ENST00000556315 USP19O94966 1318 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 THBS1P07996 1170 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 CENPCQ03188 943 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
ATXN3-239ENST00000556315 XAGE2Q96GT9 111 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms