RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
MTHFD1-213ENST00000556284 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 PDE6BP35913 854 aa12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 PTGER2P43116 358 aa12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
MTHFD1-213ENST00000556284 IFIT5Q13325 482 aaKnown RBP12.5□□□□□ -0.41
MTHFD1-213ENST00000556284 CCDC57Q2TAC2 916 aa12.5□□□□□ -0.41
MTHFD1-213ENST00000556284 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
MTHFD1-213ENST00000556284 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
MTHFD1-213ENST00000556284 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
MTHFD1-213ENST00000556284 PNMA6EA0A0J9YXQ4 647 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 GREM2Q9H772 168 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
MTHFD1-213ENST00000556284 NRXN2Q9P2S2 1712 aa12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 ITGA6P23229 1130 aa12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 COPRSQ9NQ92 184 aa12.48□□□□□ -0.41
MTHFD1-213ENST00000556284 C10orf71Q711Q0 1435 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 H0YIN7 160 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 NPR1P16066 1061 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 HSP90AB4PQ58FF6 505 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 CD2APQ9Y5K6 639 aa12.47□□□□□ -0.41
MTHFD1-213ENST00000556284 IGHDP01880 384 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 SRGNP10124 158 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 TGFB2P61812 414 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 GCC1Q96CN9 775 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 MASTLQ96GX5 879 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 DCTPP1Q9H773 170 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
MTHFD1-213ENST00000556284 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 BBOX1O75936 387 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 CIAO1O76071 339 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 ALDH1B1P30837 517 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 RPS8P62241 208 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 G3BP1Q13283 466 aaKnown RBP eCLIP12.45□□□□□ -0.425e-10■■□□□ 13.8
MTHFD1-213ENST00000556284 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
MTHFD1-213ENST00000556284 LAMB2P55268 1798 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 GRAPQ13588 217 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 IER5LQ5T953 404 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 B4GALNT3Q6L9W6 998 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 KLHDC4Q8TBB5 520 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 PA2G4Q9UQ80 394 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-213ENST00000556284 EYA2O00167 538 aa12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
MTHFD1-213ENST00000556284 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 DPEP1P16444 411 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 CHRNA5P30532 468 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 SIL1Q9H173 461 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 CNNM1Q9NRU3 951 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 MYH3P11055 1940 aa12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
MTHFD1-213ENST00000556284 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
MTHFD1-213ENST00000556284 KCNA3P22001 575 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms