RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
CHGA-205ENST00000556098 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 TRPA1O75762 1119 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 PROSER3Q2NL68 480 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 SP8Q8IXZ3 490 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 C2orf69Q8N8R5 385 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 HHIPL1Q96JK4 782 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 VPS33BQ9H267 617 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
CHGA-205ENST00000556098 CDHR2Q9BYE9 1310 aa14.1□□□□□ -0.15
CHGA-205ENST00000556098 G3V3G9 751 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 PSMD14O00487 310 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 BBOX1O75936 387 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 GRAPQ13588 217 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
CHGA-205ENST00000556098 GRAPLQ8TC17 118 aaPredicted RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 ZC3H15Q8WU90 426 aaKnown RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 GBA2Q9HCG7 927 aaPredicted RBP14.09□□□□□ -0.15
CHGA-205ENST00000556098 COL4A1P02462 1669 aa14.08□□□□□ -0.16
CHGA-205ENST00000556098 WASHC4Q2M389 1173 aa14.08□□□□□ -0.16
CHGA-205ENST00000556098 RTFDC1Q9BY42 306 aaPredicted RBP14.08□□□□□ -0.16
CHGA-205ENST00000556098 BABAM1Q9NWV8 329 aa14.08□□□□□ -0.16
CHGA-205ENST00000556098 NSFL1CQ9UNZ2 370 aaKnown RBP14.08□□□□□ -0.16
CHGA-205ENST00000556098 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
CHGA-205ENST00000556098 EGFRP00533 1210 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 ALDH1L2Q3SY69 923 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 HSP90AB3PQ58FF7 597 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 XAGE3Q8WTP9 111 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 PCDH10Q9P2E7 1040 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 PGAP2Q9UHJ9 254 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
CHGA-205ENST00000556098 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 SH3TC1Q8TE82 1336 aa14.07□□□□□ -0.16
CHGA-205ENST00000556098 MYH3P11055 1940 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 ECE2O60344 883 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 ZNF853P0CG23 659 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 KIF4BQ2VIQ3 1234 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 SLC10A5Q5PT55 438 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 RNF186Q9NXI6 227 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 GGA3Q9NZ52 723 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 KIF16BQ96L93 1317 aa14.06□□□□□ -0.16
CHGA-205ENST00000556098 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
CHGA-205ENST00000556098 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
CHGA-205ENST00000556098 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
CHGA-205ENST00000556098 CCDC102AQ96A19 550 aa14.05□□□□□ -0.16
CHGA-205ENST00000556098 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
CHGA-205ENST00000556098 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
CHGA-205ENST00000556098 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
CHGA-205ENST00000556098 GPSM2P81274 684 aa14.04□□□□□ -0.16
CHGA-205ENST00000556098 CELF1Q92879 486 aaKnown RBP14.04□□□□□ -0.16
CHGA-205ENST00000556098 SCAF8Q9UPN6 1271 aaKnown RBP14.04□□□□□ -0.16
CHGA-205ENST00000556098 ASTN2O75129 1339 aaPredicted RBP14.04□□□□□ -0.16
CHGA-205ENST00000556098 ATP5J2-PTCD1G3V325 749 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
CHGA-205ENST00000556098 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 PDIA6Q15084 440 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 CDCA5Q96FF9 252 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 EYA3Q99504 573 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 SAGE1Q9NXZ1 904 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
CHGA-205ENST00000556098 SLC10A3P09131 477 aa14.02□□□□□ -0.17
CHGA-205ENST00000556098 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.17
CHGA-205ENST00000556098 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
CHGA-205ENST00000556098 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
CHGA-205ENST00000556098 CTU1Q7Z7A3 348 aaKnown RBP14.02□□□□□ -0.17
CHGA-205ENST00000556098 DPF2Q92785 391 aa14.02□□□□□ -0.17
CHGA-205ENST00000556098 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
CHGA-205ENST00000556098 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.17
CHGA-205ENST00000556098 RTL9Q8NET4 1388 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 IPO8O15397 1037 aaKnown RBP14.01□□□□□ -0.17
CHGA-205ENST00000556098 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
CHGA-205ENST00000556098 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
CHGA-205ENST00000556098 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 LRP10Q7Z4F1 713 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 FBXW7Q969H0 707 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 CHPF2Q9P2E5 772 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 POLLQ9UGP5 575 aa14.01□□□□□ -0.17
CHGA-205ENST00000556098 UFL1O94874 794 aa14□□□□□ -0.17
CHGA-205ENST00000556098 RPS12P25398 132 aaKnown RBP14□□□□□ -0.17
CHGA-205ENST00000556098 MOB2Q70IA6 237 aa14□□□□□ -0.17
CHGA-205ENST00000556098 RASAL3Q86YV0 1011 aa14□□□□□ -0.17
CHGA-205ENST00000556098 CCDC85AQ96PX6 553 aaPredicted RBP14□□□□□ -0.17
CHGA-205ENST00000556098 CSRNP1Q96S65 589 aa14□□□□□ -0.17
CHGA-205ENST00000556098 ZC3H12CQ9C0D7 883 aaKnown RBP14□□□□□ -0.17
CHGA-205ENST00000556098 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
CHGA-205ENST00000556098 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
CHGA-205ENST00000556098 CHL1O00533 1208 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 PRPF38BQ5VTL8 546 aaKnown RBP13.99□□□□□ -0.17
CHGA-205ENST00000556098 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms