RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 DEPDC4Q8N2C3 294 aa5.93□□□□□ -1.46
EFCAB11-210ENST00000556078 POU5F2Q8N7G0 328 aa5.93□□□□□ -1.46
EFCAB11-210ENST00000556078 SNAPC4Q5SXM2 1469 aa5.93□□□□□ -1.46
EFCAB11-210ENST00000556078 DHX15O43143 795 aaKnown RBP5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 INPP5BP32019 993 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 NRLP54845 237 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 NFIAQ12857 509 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 RTN1Q16799 776 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 PLEKHM2Q8IWE5 1019 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 LARGE2Q8N3Y3 721 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 UBL7Q96S82 380 aaPredicted RBP5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 BCS1LQ9Y276 419 aa5.92□□□□□ -1.46
EFCAB11-210ENST00000556078 WIZO95785 1651 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 PRR19A6NJB7 356 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 GLB1P16278 677 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 MLLT1Q03111 559 aaPredicted RBP5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 SETDB1Q15047 1291 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 UVSSAQ2YD98 709 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 TSEN2Q8NCE0 465 aaKnown RBP5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 IFT43Q96FT9 208 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 ATAD2Q6PL18 1390 aa5.91□□□□□ -1.46
EFCAB11-210ENST00000556078 PALM3A6NDB9 673 aaPredicted RBP5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 RARAP10276 462 aa5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 TARSP26639 723 aaKnown RBP5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 RNF43Q68DV7 783 aa5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 SIX5Q8N196 739 aa5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 ARMC10Q8N2F6 343 aa5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.46
EFCAB11-210ENST00000556078 KRT25Q7Z3Z0 450 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 CACTIN-AS1Q8N1I8 211 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 PLD4Q96BZ4 506 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 NGLY1Q96IV0 654 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 DBNDD2Q9BQY9 259 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 CEP41Q9BYV8 373 aa5.89□□□□□ -1.47
EFCAB11-210ENST00000556078 DKK1O94907 266 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 EIF2AK2P19525 551 aaKnown RBP5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 OGFOD1Q8N543 542 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 IL22RA1Q8N6P7 574 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 ASIC4Q96FT7 647 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 MUC3BQ9H195 1237 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 C7orf69Q9H7B7 122 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 TLR7Q9NYK1 1049 aaKnown RBP5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 CEP170Q5SW79 1584 aa5.88□□□□□ -1.47
EFCAB11-210ENST00000556078 LOC102724428A0A0B4J2F2 783 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 SASH3O75995 380 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 EGFRP00533 1210 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 HOXD8P13378 290 aaPredicted RBP5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 IDH3AP50213 366 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 ARSDP51689 593 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 SIK1P57059 783 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 HFE2Q6ZVN8 426 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 SCG3Q8WXD2 468 aaKnown RBP5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 FAM46AQ96IP4 442 aaKnown RBP5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 RAD54L2Q9Y4B4 1467 aa5.87□□□□□ -1.47
EFCAB11-210ENST00000556078 USP17L3A6NCW0 530 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 USP17L4A6NCW7 530 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 GDF6Q6KF10 455 aaPredicted RBP5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 SPOCD1Q6ZMY3 1216 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 USP17L1Q7RTZ2 530 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 TRIM42Q8IWZ5 723 aa5.86□□□□□ -1.47
EFCAB11-210ENST00000556078 MAPKBP1O60336 1514 aa5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 TDRD9Q8NDG6 1382 aaKnown RBP5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 UTP4Q969X6 686 aaKnown RBP5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 MYRFLQ96LU7 910 aa5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 RBM19Q9Y4C8 960 aaKnown RBP5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 PBRM1Q86U86 1689 aa5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 SHROOM2Q13796 1616 aa5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 ADCY10Q96PN6 1610 aa5.85□□□□□ -1.47
EFCAB11-210ENST00000556078 HMX2A2RU54 273 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 GHRHP01286 108 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 CLEC10AQ8IUN9 316 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 CHMP7Q8WUX9 453 aaPredicted RBP5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 BCANQ96GW7 911 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 FAM83CQ9BQN1 747 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 MKRN1Q9UHC7 482 aaKnown RBP5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 PPME1Q9Y570 386 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 KIF21BO75037 1637 aa5.84□□□□□ -1.47
EFCAB11-210ENST00000556078 DNMBPQ6XZF7 1577 aa5.84□□□□□ -1.48
EFCAB11-210ENST00000556078 J3QW42 95 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 MICAL2O94851 1124 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 SOX18P35713 384 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 ZNF124Q15973 351 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 ZNF648Q5T619 568 aaPredicted RBP5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 GALNT11Q8NCW6 608 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 RBSNQ9H1K0 784 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 KLK14Q9P0G3 267 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 TOP2BQ02880 1626 aa5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 PCF11O94913 1555 aaKnown RBP5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 POLA1P09884 1462 aaPredicted RBP5.83□□□□□ -1.48
EFCAB11-210ENST00000556078 TM4SF5O14894 197 aa5.82□□□□□ -1.48
EFCAB11-210ENST00000556078 WISP1O95388 367 aa5.82□□□□□ -1.48
EFCAB11-210ENST00000556078 PSAPP07602 524 aa5.82□□□□□ -1.48
EFCAB11-210ENST00000556078 CD68P34810 354 aaPredicted RBP5.82□□□□□ -1.48
EFCAB11-210ENST00000556078 MCM6Q14566 821 aa5.82□□□□□ -1.48
EFCAB11-210ENST00000556078 ACAD11Q709F0 780 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms