RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CCDC144BQ3MJ40 725 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 PEAR1Q5VY43 1037 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 FIGNL1Q6PIW4 674 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 RELL1Q8IUW5 271 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 C3orf58Q8NDZ4 430 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 OR13H1Q8NG92 308 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 RASGRP4Q8TDF6 673 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 GAS2L1Q99501 681 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 LATS2Q9NRM7 1088 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 KANSL3Q9P2N6 904 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 SALL4Q9UJQ4 1053 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 TMEM238LA0A1B0GVL6 79 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 EFSO43281 561 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 MMP20O60882 483 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 AVPP01185 164 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 RARAP10276 462 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 RLBP1P12271 317 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 FCGRTP55899 365 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 LAMC2Q13753 1193 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 CCDC85BQ15834 202 aaPredicted RBP4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 KRT25Q7Z3Z0 450 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 KIAA0825Q8IV33 1275 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 PMFBP1Q8TBY8 1022 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 SEC16BQ96JE7 1060 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 SPON2Q9BUD6 331 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 OXCT2Q9BYC2 517 aaPredicted RBP4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 GSX2Q9BZM3 304 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 LIN7BQ9HAP6 207 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 ZFYVE1Q9HBF4 777 aa4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
MTHFD1-212ENST00000555858 ATXN7O15265 892 aaPredicted RBP4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 BMP1P13497 986 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 TARSP26639 723 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 SOX18P35713 384 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 MAP3K10Q02779 954 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 SFSWAPQ12872 951 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.48□□□□□ -1.696e-6■■□□□ 12.4
MTHFD1-212ENST00000555858 DTHD1Q6ZMT9 781 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 SV2BQ7L1I2 683 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 TRIM46Q7Z4K8 759 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 TMEM74Q96NL1 305 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 PNMA5Q96PV4 448 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 EFCC1Q9HA90 598 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 ADAMTS1Q9UHI8 967 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 PCDHGC4Q9Y5F7 938 aa4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.48□□□□□ -1.69
MTHFD1-212ENST00000555858 FAM187AA6NFU0 413 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 KHNYNO15037 678 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 KIF4AO95239 1232 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 PSAPP07602 524 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 HOXD8P13378 290 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 NCLP19338 710 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 GBP2P32456 591 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 EIF4A3P38919 411 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 SMCPP49901 116 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 HYAL2Q12891 473 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 CTC1Q2NKJ3 1217 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 NCAPG2Q86XI2 1143 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 CCNJLQ8IV13 435 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 ZFP42Q96MM3 310 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 TCF12Q99081 682 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 OSBPL2Q9H1P3 480 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 ZSWIM4Q9H7M6 989 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 TLR7Q9NYK1 1049 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 ZFATQ9P243 1243 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 DNMT3LQ9UJW3 386 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 PDZRN3Q9UPQ7 1066 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 AKAP2Q9Y2D5 859 aa4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-212ENST00000555858 SENP3-EIF4A1A0A087X0R7 540 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 TLDC2A0PJX2 215 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 DCDC2BA2VCK2 349 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 MINDY4BA8MYZ0 360 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 MAP3K6O95382 1288 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 MAPTP10636 758 aaKnown RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 NASPP49321 788 aaPredicted RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 PLAURQ03405 335 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 TNP2Q05952 138 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 NBPF6Q5VWK0 638 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 RIPOR1Q6ZS17 1223 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CKAP2LQ8IYA6 745 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 ZNF296Q8WUU4 475 aaPredicted RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 NBPF4Q96M43 638 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CNTNAP3BQ96NU0 1288 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 OSMRQ99650 979 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 ZKSCAN3Q9BRR0 538 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 TRIM56Q9BRZ2 755 aaKnown RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CNTNAP3Q9BZ76 1288 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CEP44Q9C0F1 390 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 NUCKS1Q9H1E3 243 aaKnown RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 PIF1Q9H611 641 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 KCNQ5Q9NR82 932 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 STRIP2Q9ULQ0 834 aa4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 CDK11AQ9UQ88 783 aaPredicted RBP4.46□□□□□ -1.7
MTHFD1-212ENST00000555858 F6X3S4 739 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 H7C1W4 665 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 MAN1A2O60476 641 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms