RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 ITGB7P26010 798 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 ARSDP51689 593 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
ATXN3-233ENST00000555816 PSAPL1Q6NUJ1 521 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 FAM200AQ8TCP9 573 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 VTI1AQ96AJ9 217 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
ATXN3-233ENST00000555816 DYRK3O43781 588 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 NFKB1P19838 968 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 IDH3AP50213 366 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 TBC1D8BQ0IIM8 1120 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 ARXQ96QS3 562 aa8.38□□□□□ -1.07
ATXN3-233ENST00000555816 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ATXN3-233ENST00000555816 ZMYM1Q5SVZ6 1142 aa8.37□□□□□ -1.07
ATXN3-233ENST00000555816 TXNRD3Q86VQ6 643 aa8.37□□□□□ -1.07
ATXN3-233ENST00000555816 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-233ENST00000555816 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-233ENST00000555816 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-233ENST00000555816 MICAL2O94851 1124 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 EGFRP00533 1210 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 SELPP16109 830 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 MSL1Q68DK7 614 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-233ENST00000555816 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-233ENST00000555816 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
ATXN3-233ENST00000555816 DGKZQ13574 1117 aa8.35□□□□□ -1.07
ATXN3-233ENST00000555816 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
ATXN3-233ENST00000555816 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
ATXN3-233ENST00000555816 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-233ENST00000555816 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
ATXN3-233ENST00000555816 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
ATXN3-233ENST00000555816 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
ATXN3-233ENST00000555816 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
ATXN3-233ENST00000555816 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-233ENST00000555816 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 RFX1P22670 979 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 GRNP28799 593 aaKnown RBP8.33□□□□□ -1.08
ATXN3-233ENST00000555816 NRLP54845 237 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 GPLD1P80108 840 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 DMRTC2Q8IXT2 367 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-233ENST00000555816 DCAF11Q8TEB1 546 aa8.33□□□□□ -1.08
ATXN3-233ENST00000555816 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 RARAP10276 462 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 IGF2-ASQ6U949 168 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 IFT43Q96FT9 208 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
ATXN3-233ENST00000555816 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 OPLAHO14841 1288 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 CPB1P15086 417 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
ATXN3-233ENST00000555816 ELOAQ14241 798 aaKnown RBP8.31□□□□□ -1.08
ATXN3-233ENST00000555816 GRIK5Q16478 980 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 WFDC8Q8IUA0 241 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
ATXN3-233ENST00000555816 USP21Q9UK80 565 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
ATXN3-233ENST00000555816 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-233ENST00000555816 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-233ENST00000555816 SASH3O75995 380 aa8.3□□□□□ -1.08
ATXN3-233ENST00000555816 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
ATXN3-233ENST00000555816 SRA1Q9HD15 236 aaKnown RBP8.3□□□□□ -1.08
ATXN3-233ENST00000555816 ACIN1Q9UKV3 1341 aaKnown RBP8.29□□□□□ -1.08
ATXN3-233ENST00000555816 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-233ENST00000555816 SOX18P35713 384 aa8.29□□□□□ -1.08
ATXN3-233ENST00000555816 ARTNQ5T4W7 220 aa8.29□□□□□ -1.08
ATXN3-233ENST00000555816 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
ATXN3-233ENST00000555816 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-233ENST00000555816 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
ATXN3-233ENST00000555816 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 XYLBO75191 536 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 PLAURQ03405 335 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 KRT25Q7Z3Z0 450 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
ATXN3-233ENST00000555816 LGR5O75473 907 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 PSAPP07602 524 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 BRD2P25440 801 aaKnown RBP8.27□□□□□ -1.09
ATXN3-233ENST00000555816 TREML1Q86YW5 311 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 MAP4K3Q8IVH8 894 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 TP53INP1Q96A56 240 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 ZFP64Q9NPA5 681 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
ATXN3-233ENST00000555816 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
ATXN3-233ENST00000555816 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms