RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 TDRD7Q8NHU6 1098 aaKnown RBP20.82■□□□□ 0.92
RCCD1-204ENST00000555737 CFAP45Q9UL16 551 aa20.82■□□□□ 0.92
RCCD1-204ENST00000555737 TIMM10P62072 90 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 SNRKQ9NRH2 765 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-204ENST00000555737 ELP1O95163 1332 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 ZBTB22O15209 634 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 CTIFO43310 598 aaKnown RBP20.81■□□□□ 0.92
RCCD1-204ENST00000555737 PHF8Q9UPP1 1060 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 TTLL5Q6EMB2 1281 aa20.81■□□□□ 0.92
RCCD1-204ENST00000555737 ALDH1L1O75891 902 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 CTNNA3Q9UI47 895 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 AKAP4Q5JQC9 854 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 TMC6Q7Z403 805 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 HOMER1Q86YM7 354 aa20.8■□□□□ 0.92
RCCD1-204ENST00000555737 GTPBP4Q9BZE4 634 aaKnown RBP20.8■□□□□ 0.92
RCCD1-204ENST00000555737 IP6K1Q92551 441 aa20.79■□□□□ 0.92
RCCD1-204ENST00000555737 GOLGA8FQ08AF8 430 aa20.79■□□□□ 0.92
RCCD1-204ENST00000555737 GOLGA8DPQ0D2H9 430 aa20.79■□□□□ 0.92
RCCD1-204ENST00000555737 STX1AQ16623 288 aa20.79■□□□□ 0.92
RCCD1-204ENST00000555737 NFATC2IPQ8NCF5 419 aa20.79■□□□□ 0.92
RCCD1-204ENST00000555737 COL15A1P39059 1388 aa20.78■□□□□ 0.92
RCCD1-204ENST00000555737 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
RCCD1-204ENST00000555737 OGFRQ9NZT2 677 aa20.78■□□□□ 0.92
RCCD1-204ENST00000555737 IQCB1Q15051 598 aa20.78■□□□□ 0.92
RCCD1-204ENST00000555737 UTP14CQ5TAP6 766 aaKnown RBP20.78■□□□□ 0.92
RCCD1-204ENST00000555737 SYT10Q6XYQ8 523 aa20.78■□□□□ 0.92
RCCD1-204ENST00000555737 XRN1Q8IZH2 1706 aaKnown RBP20.77■□□□□ 0.92
RCCD1-204ENST00000555737 MTX1Q13505 466 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 KMT5BQ4FZB7 885 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 PAXBP1Q9Y5B6 917 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 A0A087WZG4 1122 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.92
RCCD1-204ENST00000555737 TNNI3KQ59H18 835 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 LRRN4CLQ8ND94 238 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 NLRP2Q9NX02 1062 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 IFNKQ9P0W0 207 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 FPGT-TNNI3KV9GXZ4 949 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 TECPR2O15040 1411 aa20.77■□□□□ 0.92
RCCD1-204ENST00000555737 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.91
RCCD1-204ENST00000555737 STK38Q15208 465 aa20.76■□□□□ 0.91
RCCD1-204ENST00000555737 ERCC6LQ2NKX8 1250 aa20.76■□□□□ 0.91
RCCD1-204ENST00000555737 CEP57L1Q8IYX8 460 aa20.76■□□□□ 0.91
RCCD1-204ENST00000555737 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
RCCD1-204ENST00000555737 ANKRD24Q8TF21 1146 aa20.76■□□□□ 0.91
RCCD1-204ENST00000555737 AKAP12Q02952 1782 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 SETD1AO15047 1707 aaKnown RBP20.75■□□□□ 0.91
RCCD1-204ENST00000555737 MARCKSP29966 332 aaPredicted RBP20.75■□□□□ 0.91
RCCD1-204ENST00000555737 DPCR1Q3MIW9 517 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 FBXO38Q6PIJ6 1188 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 KCNB2Q92953 911 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 NEURL1BA8MQ27 555 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 GCKRQ14397 625 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 MCMDC2Q4G0Z9 681 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 NSUN7Q8NE18 718 aaKnown RBP20.75■□□□□ 0.91
RCCD1-204ENST00000555737 ZNF594Q96JF6 807 aaPredicted RBP20.75■□□□□ 0.91
RCCD1-204ENST00000555737 RXRAP19793 462 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 KRT32Q14532 448 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 LMBR1LQ6UX01 489 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 HMG20BQ9P0W2 317 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 HDAC5Q9UQL6 1122 aa20.75■□□□□ 0.91
RCCD1-204ENST00000555737 SPATA31D1Q6ZQQ2 1576 aa20.74■□□□□ 0.91
RCCD1-204ENST00000555737 WASHC4Q2M389 1173 aa20.74■□□□□ 0.91
RCCD1-204ENST00000555737 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
RCCD1-204ENST00000555737 KIF18AQ8NI77 898 aa20.74■□□□□ 0.91
RCCD1-204ENST00000555737 ANO10Q9NW15 660 aa20.74■□□□□ 0.91
RCCD1-204ENST00000555737 BABAM1Q9NWV8 329 aa20.74■□□□□ 0.91
RCCD1-204ENST00000555737 CTDNEP1O95476 244 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 NDUFA8P51970 172 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 XPO4Q9C0E2 1151 aaKnown RBP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 DDX21Q9NR30 783 aaKnown RBP eCLIP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 DHX40Q8IX18 779 aaKnown RBP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 CLIC4Q9Y696 253 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 SNW1Q13573 536 aaKnown RBP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 ORAI2Q96SN7 254 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 PCDHA7Q9UN72 937 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 AXIN2Q9Y2T1 843 aa20.73■□□□□ 0.91
RCCD1-204ENST00000555737 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
RCCD1-204ENST00000555737 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
RCCD1-204ENST00000555737 FAM208AQ9UK61 1670 aaKnown RBP20.72■□□□□ 0.91
RCCD1-204ENST00000555737 CSB-PGBD3P0DP91 1061 aa20.72■□□□□ 0.91
RCCD1-204ENST00000555737 ANKRD13DQ6ZTN6 518 aa20.72■□□□□ 0.91
RCCD1-204ENST00000555737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.72■□□□□ 0.91
RCCD1-204ENST00000555737 FEZ1Q99689 392 aa20.72■□□□□ 0.91
RCCD1-204ENST00000555737 EPC1Q9H2F5 836 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 PXDNLA1KZ92 1463 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 PTPN12Q05209 780 aaKnown RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 DHX32Q7L7V1 743 aaKnown RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 CCAR2Q8N163 923 aaKnown RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 ZNF496Q96IT1 587 aaPredicted RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 DDX41Q9UJV9 622 aaKnown RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 MED23Q9ULK4 1368 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 ZNF609O15014 1411 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 RGPD1P0DJD0 1748 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 POLR3GO15318 223 aaPredicted RBP20.71■□□□□ 0.91
RCCD1-204ENST00000555737 HOXB7P09629 217 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 CCZ1BP86790 482 aa20.71■□□□□ 0.91
RCCD1-204ENST00000555737 CCZ1P86791 482 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms