RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 MICALL2Q8IY33 904 aa19.69■□□□□ 0.74
SNX6-205ENST00000555648 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
SNX6-205ENST00000555648 AIDAQ96BJ3 306 aa19.69■□□□□ 0.74
SNX6-205ENST00000555648 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
SNX6-205ENST00000555648 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
SNX6-205ENST00000555648 VAMP4O75379 141 aa19.68■□□□□ 0.74
SNX6-205ENST00000555648 VEGFBP49765 207 aa19.68■□□□□ 0.74
SNX6-205ENST00000555648 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
SNX6-205ENST00000555648 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
SNX6-205ENST00000555648 XDHP47989 1333 aa19.68■□□□□ 0.74
SNX6-205ENST00000555648 ATP2B4P23634 1241 aa19.67■□□□□ 0.74
SNX6-205ENST00000555648 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
SNX6-205ENST00000555648 TTLL11Q8NHH1 800 aa19.67■□□□□ 0.74
SNX6-205ENST00000555648 ZC3H15Q8WU90 426 aaKnown RBP19.67■□□□□ 0.74
SNX6-205ENST00000555648 DPF2Q92785 391 aa19.67■□□□□ 0.74
SNX6-205ENST00000555648 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
SNX6-205ENST00000555648 TRAF5O00463 557 aa19.66■□□□□ 0.74
SNX6-205ENST00000555648 IGHMBP2P38935 993 aaKnown RBP19.66■□□□□ 0.74
SNX6-205ENST00000555648 GCKRQ14397 625 aa19.66■□□□□ 0.74
SNX6-205ENST00000555648 LINS1Q8NG48 757 aa19.66■□□□□ 0.74
SNX6-205ENST00000555648 GREM2Q9H772 168 aa19.66■□□□□ 0.74
SNX6-205ENST00000555648 H7C1W4 665 aa19.65■□□□□ 0.74
SNX6-205ENST00000555648 COL13A1Q5TAT6 717 aaPredicted RBP19.65■□□□□ 0.74
SNX6-205ENST00000555648 TRPM4Q8TD43 1214 aa19.65■□□□□ 0.74
SNX6-205ENST00000555648 LTBP1Q14766 1721 aa19.65■□□□□ 0.74
SNX6-205ENST00000555648 ADAMTSL1Q8N6G6 1762 aa19.65■□□□□ 0.74
SNX6-205ENST00000555648 ECE1P42892 770 aa19.64■□□□□ 0.73
SNX6-205ENST00000555648 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
SNX6-205ENST00000555648 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.73
SNX6-205ENST00000555648 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
SNX6-205ENST00000555648 ZNF408Q9H9D4 720 aa19.64■□□□□ 0.73
SNX6-205ENST00000555648 BSDC1Q9NW68 430 aaPredicted RBP19.64■□□□□ 0.73
SNX6-205ENST00000555648 DUOX1Q9NRD9 1551 aa19.64■□□□□ 0.73
SNX6-205ENST00000555648 CELF2O95319 508 aaKnown RBP19.63■□□□□ 0.73
SNX6-205ENST00000555648 FMR1Q06787 632 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNX6-205ENST00000555648 GRM1Q13255 1194 aa19.63■□□□□ 0.73
SNX6-205ENST00000555648 TNS4Q8IZW8 715 aa19.63■□□□□ 0.73
SNX6-205ENST00000555648 GLIS2Q9BZE0 524 aaPredicted RBP19.63■□□□□ 0.73
SNX6-205ENST00000555648 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 WDR33Q9C0J8 1336 aaKnown RBP19.62■□□□□ 0.73
SNX6-205ENST00000555648 SHTN1A0MZ66 631 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
SNX6-205ENST00000555648 TBC1D10BQ4KMP7 808 aaPredicted RBP19.62■□□□□ 0.73
SNX6-205ENST00000555648 SAMD7Q7Z3H4 446 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 KCNQ5Q9NR82 932 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 PGAP2Q9UHJ9 254 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 TAF1P21675 1872 aa19.62■□□□□ 0.73
SNX6-205ENST00000555648 RTL9Q8NET4 1388 aa19.61■□□□□ 0.73
SNX6-205ENST00000555648 VIL1P09327 827 aaKnown RBP19.61■□□□□ 0.73
SNX6-205ENST00000555648 ITGA6P23229 1130 aa19.61■□□□□ 0.73
SNX6-205ENST00000555648 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
SNX6-205ENST00000555648 PLA2G12BQ9BX93 195 aa19.61■□□□□ 0.73
SNX6-205ENST00000555648 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
SNX6-205ENST00000555648 MINPP1Q9UNW1 487 aa19.61■□□□□ 0.73
SNX6-205ENST00000555648 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
SNX6-205ENST00000555648 CST9Q5W186 159 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 PODNQ7Z5L7 613 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 USP48Q86UV5 1035 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 CAPNS2Q96L46 248 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 BEGAINQ9BUH8 593 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 ANKRD2Q9GZV1 360 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 CHMP3Q9Y3E7 222 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
SNX6-205ENST00000555648 ANKRD18BA2A2Z9 1011 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 F6X3S4 739 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 KCNJ4P48050 445 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 CTCFP49711 727 aaPredicted RBP19.59■□□□□ 0.73
SNX6-205ENST00000555648 KIF4BQ2VIQ3 1234 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 FAM161AQ3B820 660 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 KRT26Q7Z3Y9 468 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 AGBL3Q8NEM8 1001 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
SNX6-205ENST00000555648 USP17L3A6NCW0 530 aa19.58■□□□□ 0.72
SNX6-205ENST00000555648 USP17L4A6NCW7 530 aa19.58■□□□□ 0.72
SNX6-205ENST00000555648 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.72
SNX6-205ENST00000555648 RSBN1LQ6PCB5 846 aaPredicted RBP19.58■□□□□ 0.72
SNX6-205ENST00000555648 USP17L1Q7RTZ2 530 aa19.58■□□□□ 0.72
SNX6-205ENST00000555648 FBXW7Q969H0 707 aa19.58■□□□□ 0.72
SNX6-205ENST00000555648 COL4A1P02462 1669 aa19.58■□□□□ 0.72
SNX6-205ENST00000555648 FOXN1O15353 648 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 IFIT5Q13325 482 aaKnown RBP19.57■□□□□ 0.72
SNX6-205ENST00000555648 CYP4F22Q6NT55 531 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 SULF1Q8IWU6 871 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 WBP1LQ9NX94 342 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
SNX6-205ENST00000555648 MED23Q9ULK4 1368 aa19.57■□□□□ 0.72
SNX6-205ENST00000555648 CSF1RP07333 972 aa19.56■□□□□ 0.72
SNX6-205ENST00000555648 CASP7P55210 303 aa19.56■□□□□ 0.72
SNX6-205ENST00000555648 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
SNX6-205ENST00000555648 BEND3Q5T5X7 828 aa19.56■□□□□ 0.72
SNX6-205ENST00000555648 COA1Q9GZY4 146 aa19.56■□□□□ 0.72
SNX6-205ENST00000555648 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
SNX6-205ENST00000555648 SAPCD2Q86UD0 394 aa19.55■□□□□ 0.72
SNX6-205ENST00000555648 ZNF804BA4D1E1 1349 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 GRM8O00222 908 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 EGFRP00533 1210 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 CCDC57Q2TAC2 916 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 OGFOD1Q8N543 542 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 SRCIN1Q9C0H9 1055 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms