RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
PRKCH-218ENST00000555628 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
PRKCH-218ENST00000555628 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
PRKCH-218ENST00000555628 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
PRKCH-218ENST00000555628 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
PRKCH-218ENST00000555628 LAMB2P55268 1798 aa12.25□□□□□ -0.45
PRKCH-218ENST00000555628 ZNF316A6NFI3 1004 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-218ENST00000555628 LRRC37AA6NMS7 1700 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
PRKCH-218ENST00000555628 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-218ENST00000555628 GRM1Q13255 1194 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 LARGE2Q8N3Y3 721 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 GLIS2Q9BZE0 524 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-218ENST00000555628 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 BRCA2P51587 3418 aa12.24□□□□□ -0.45
PRKCH-218ENST00000555628 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
PRKCH-218ENST00000555628 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
PRKCH-218ENST00000555628 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-218ENST00000555628 CXCL9Q07325 125 aa12.23□□□□□ -0.45
PRKCH-218ENST00000555628 DGKZQ13574 1117 aa12.23□□□□□ -0.45
PRKCH-218ENST00000555628 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
PRKCH-218ENST00000555628 RTFDC1Q9BY42 306 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-218ENST00000555628 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
PRKCH-218ENST00000555628 NTSR2O95665 410 aa12.22□□□□□ -0.45
PRKCH-218ENST00000555628 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
PRKCH-218ENST00000555628 TRPM4Q8TD43 1214 aa12.22□□□□□ -0.45
PRKCH-218ENST00000555628 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
PRKCH-218ENST00000555628 CENPFP49454 3210 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
PRKCH-218ENST00000555628 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
PRKCH-218ENST00000555628 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 NOGQ13253 232 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 AOC3Q16853 763 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 MCM10Q7L590 875 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 NIM1KQ8IY84 436 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
PRKCH-218ENST00000555628 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 VPS33BQ9H267 617 aa12.21□□□□□ -0.45
PRKCH-218ENST00000555628 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 TBC1D12O60347 775 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
PRKCH-218ENST00000555628 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
PRKCH-218ENST00000555628 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
PRKCH-218ENST00000555628 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
PRKCH-218ENST00000555628 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
PRKCH-218ENST00000555628 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
PRKCH-218ENST00000555628 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
PRKCH-218ENST00000555628 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
PRKCH-218ENST00000555628 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
PRKCH-218ENST00000555628 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
PRKCH-218ENST00000555628 SOX10P56693 466 aa12.18□□□□□ -0.46
PRKCH-218ENST00000555628 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
PRKCH-218ENST00000555628 DCTN1Q14203 1278 aa12.18□□□□□ -0.46
PRKCH-218ENST00000555628 COL4A1P02462 1669 aa12.18□□□□□ -0.46
PRKCH-218ENST00000555628 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
PRKCH-218ENST00000555628 ABCC4O15439 1325 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 TAF1P21675 1872 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 GPTP24298 496 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-218ENST00000555628 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
PRKCH-218ENST00000555628 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
PRKCH-218ENST00000555628 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
PRKCH-218ENST00000555628 EGFRP00533 1210 aa12.16□□□□□ -0.46
PRKCH-218ENST00000555628 HUNKP57058 714 aa12.16□□□□□ -0.46
PRKCH-218ENST00000555628 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
PRKCH-218ENST00000555628 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
PRKCH-218ENST00000555628 ZNF687Q8N1G0 1237 aa12.15□□□□□ -0.46
PRKCH-218ENST00000555628 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
PRKCH-218ENST00000555628 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
PRKCH-218ENST00000555628 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
PRKCH-218ENST00000555628 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
PRKCH-218ENST00000555628 RAD17O75943 681 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
PRKCH-218ENST00000555628 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-218ENST00000555628 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 ZNF408Q9H9D4 720 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
PRKCH-218ENST00000555628 CNOT7Q9UIV1 285 aaKnown RBP12.14□□□□□ -0.47
PRKCH-218ENST00000555628 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
PRKCH-218ENST00000555628 SLC10A3P09131 477 aa12.13□□□□□ -0.47
PRKCH-218ENST00000555628 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-218ENST00000555628 PDIA6Q15084 440 aa12.13□□□□□ -0.47
PRKCH-218ENST00000555628 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms