RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 TJP1Q07157 1748 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 EYA2O00167 538 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 TPM3P06753 285 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 HSP90B1P14625 803 aaKnown RBP11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 Q6ZUG5 572 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 PRDM11Q9NQV5 511 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
RPGRIP1-208ENST00000555489 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 FGD1P98174 961 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 STK3Q13188 491 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 COL9A3Q14050 684 aaPredicted RBP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 DHX32Q7L7V1 743 aaKnown RBP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 CFAP45Q9UL16 551 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 H3BQV1 296 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 IL2RBP14784 551 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 SEC62Q99442 399 aaKnown RBP11.75□□□□□ -0.53
RPGRIP1-208ENST00000555489 GOLIM4O00461 696 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 PFKFB2O60825 505 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 AGXT2Q9BYV1 514 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 GOLGA6L6A8MZA4 724 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 PIBF1Q8WXW3 757 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 BRF1Q92994 677 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 CARD10Q9BWT7 1032 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
RPGRIP1-208ENST00000555489 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 CAVIN2O95810 425 aa11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 RESTQ13127 1097 aa11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 ATL3Q6DD88 541 aa11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 RBM43Q6ZSC3 357 aaKnown RBP11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 ABCC12Q96J65 1359 aa11.73□□□□□ -0.53
RPGRIP1-208ENST00000555489 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 A1BGP04217 495 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 SCRN1Q12765 414 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 FBXL16Q8N461 479 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 JAK2O60674 1132 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 LIG1P18858 919 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 TIMM10P62072 90 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 EXOSC10Q01780 885 aaKnown RBP11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 TYRO3Q06418 890 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 SASS6Q6UVJ0 657 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
RPGRIP1-208ENST00000555489 MAST3O60307 1309 aa11.71□□□□□ -0.53
RPGRIP1-208ENST00000555489 DTNBO60941 627 aa11.71□□□□□ -0.53
RPGRIP1-208ENST00000555489 BICD2Q8TD16 824 aa11.71□□□□□ -0.53
RPGRIP1-208ENST00000555489 ZNF274Q96GC6 653 aaPredicted RBP11.71□□□□□ -0.53
RPGRIP1-208ENST00000555489 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.53
RPGRIP1-208ENST00000555489 E7EWF7 191 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 TCIRG1Q13488 830 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 LRRC24Q50LG9 513 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 TFIP11Q9UBB9 837 aaKnown RBP11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 MRVI1Q9Y6F6 885 aa11.71□□□□□ -0.54
RPGRIP1-208ENST00000555489 CHGBP05060 677 aa11.7□□□□□ -0.54
RPGRIP1-208ENST00000555489 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
RPGRIP1-208ENST00000555489 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
RPGRIP1-208ENST00000555489 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 DYNC1I1O14576 645 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 CTAGE5O15320 804 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 PCCAP05165 728 aaPredicted RBP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 NOLC1Q14978 699 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 CAMK4Q16566 473 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 GORABQ5T7V8 394 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms