RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 GREM2Q9H772 168 aa24.8■■□□□ 1.56
CBLN3-202ENST00000555436 GGA1Q9UJY5 639 aa24.8■■□□□ 1.56
CBLN3-202ENST00000555436 CASP7P55210 303 aa24.79■■□□□ 1.56
CBLN3-202ENST00000555436 GPR101Q96P66 508 aaPredicted RBP24.79■■□□□ 1.56
CBLN3-202ENST00000555436 ZC3H12CQ9C0D7 883 aaKnown RBP24.79■■□□□ 1.56
CBLN3-202ENST00000555436 TMEM88BA6NKF7 163 aa24.78■■□□□ 1.56
CBLN3-202ENST00000555436 F6X3S4 739 aa24.78■■□□□ 1.56
CBLN3-202ENST00000555436 ECE2O60344 883 aa24.78■■□□□ 1.56
CBLN3-202ENST00000555436 BSDC1Q9NW68 430 aaPredicted RBP24.78■■□□□ 1.56
CBLN3-202ENST00000555436 XDHP47989 1333 aa24.78■■□□□ 1.56
CBLN3-202ENST00000555436 CACNA1FO60840 1977 aa24.78■■□□□ 1.56
CBLN3-202ENST00000555436 DOK7Q18PE1 504 aa24.77■■□□□ 1.56
CBLN3-202ENST00000555436 BEND3Q5T5X7 828 aa24.77■■□□□ 1.56
CBLN3-202ENST00000555436 PSMD14O00487 310 aa24.76■■□□□ 1.55
CBLN3-202ENST00000555436 E9PSI1 815 aa24.75■■□□□ 1.55
CBLN3-202ENST00000555436 CSF1RP07333 972 aa24.75■■□□□ 1.55
CBLN3-202ENST00000555436 DPF2Q92785 391 aa24.75■■□□□ 1.55
CBLN3-202ENST00000555436 CNOT7Q9UIV1 285 aaKnown RBP24.75■■□□□ 1.55
CBLN3-202ENST00000555436 MINPP1Q9UNW1 487 aa24.75■■□□□ 1.55
CBLN3-202ENST00000555436 ATP2B4P23634 1241 aa24.74■■□□□ 1.55
CBLN3-202ENST00000555436 KCNQ5Q9NR82 932 aa24.74■■□□□ 1.55
CBLN3-202ENST00000555436 MKRN1Q9UHC7 482 aaKnown RBP24.74■■□□□ 1.55
CBLN3-202ENST00000555436 ZBTB12Q9Y330 459 aaPredicted RBP24.74■■□□□ 1.55
CBLN3-202ENST00000555436 H7C1D1 291 aa24.73■■□□□ 1.55
CBLN3-202ENST00000555436 CCER2I3L3R5 266 aa24.73■■□□□ 1.55
CBLN3-202ENST00000555436 ITGA6P23229 1130 aa24.73■■□□□ 1.55
CBLN3-202ENST00000555436 MICALL2Q8IY33 904 aa24.73■■□□□ 1.55
CBLN3-202ENST00000555436 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
CBLN3-202ENST00000555436 G3V3G9 751 aa24.72■■□□□ 1.55
CBLN3-202ENST00000555436 RPS12P25398 132 aaKnown RBP24.72■■□□□ 1.55
CBLN3-202ENST00000555436 IGHMBP2P38935 993 aaKnown RBP24.72■■□□□ 1.55
CBLN3-202ENST00000555436 FAM161AQ3B820 660 aa24.72■■□□□ 1.55
CBLN3-202ENST00000555436 DCAF8Q5TAQ9 597 aa24.72■■□□□ 1.55
CBLN3-202ENST00000555436 ZC3H15Q8WU90 426 aaKnown RBP24.72■■□□□ 1.55
CBLN3-202ENST00000555436 PGAP2Q9UHJ9 254 aa24.72■■□□□ 1.55
CBLN3-202ENST00000555436 SHTN1A0MZ66 631 aa24.71■■□□□ 1.55
CBLN3-202ENST00000555436 HIRAP54198 1017 aaPredicted RBP24.71■■□□□ 1.55
CBLN3-202ENST00000555436 TRPM4Q8TD43 1214 aa24.71■■□□□ 1.55
CBLN3-202ENST00000555436 VIL1P09327 827 aaKnown RBP24.7■■□□□ 1.54
CBLN3-202ENST00000555436 SLFN5Q08AF3 891 aa24.7■■□□□ 1.54
CBLN3-202ENST00000555436 MYH3P11055 1940 aa24.7■■□□□ 1.54
CBLN3-202ENST00000555436 PCNTO95613 3336 aa24.69■■□□□ 1.54
CBLN3-202ENST00000555436 FOXO4P98177 505 aa24.69■■□□□ 1.54
CBLN3-202ENST00000555436 WTIPA6NIX2 430 aaPredicted RBP24.68■■□□□ 1.54
CBLN3-202ENST00000555436 GRM8O00222 908 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 TRAF5O00463 557 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 ALDH1L1O75891 902 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 CCT4P50991 539 aaKnown RBP24.68■■□□□ 1.54
CBLN3-202ENST00000555436 FMR1Q06787 632 aaKnown RBP eCLIP24.68■■□□□ 1.54
CBLN3-202ENST00000555436 SLC4A10Q6U841 1118 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 MPHOSPH8Q99549 860 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 SRCIN1Q9C0H9 1055 aa24.68■■□□□ 1.54
CBLN3-202ENST00000555436 MED23Q9ULK4 1368 aa24.67■■□□□ 1.54
CBLN3-202ENST00000555436 ANKRD18BA2A2Z9 1011 aa24.67■■□□□ 1.54
CBLN3-202ENST00000555436 PODNQ7Z5L7 613 aa24.67■■□□□ 1.54
CBLN3-202ENST00000555436 MRPL50Q8N5N7 158 aaKnown RBP24.67■■□□□ 1.54
CBLN3-202ENST00000555436 RASSF10A6NK89 507 aa24.66■■□□□ 1.54
CBLN3-202ENST00000555436 SAMD7Q7Z3H4 446 aa24.66■■□□□ 1.54
CBLN3-202ENST00000555436 ANKRD2Q9GZV1 360 aa24.66■■□□□ 1.54
CBLN3-202ENST00000555436 C9orf78Q9NZ63 289 aaPredicted RBP24.66■■□□□ 1.54
CBLN3-202ENST00000555436 LEMD3Q9Y2U8 911 aa24.66■■□□□ 1.54
CBLN3-202ENST00000555436 IFIT5Q13325 482 aaKnown RBP24.65■■□□□ 1.54
CBLN3-202ENST00000555436 CDCA7LQ96GN5 454 aa24.65■■□□□ 1.54
CBLN3-202ENST00000555436 ABT1Q9ULW3 272 aaKnown RBP24.65■■□□□ 1.54
CBLN3-202ENST00000555436 ZNF609O15014 1411 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 HSPA1AP0DMV8 641 aaKnown RBP24.64■■□□□ 1.54
CBLN3-202ENST00000555436 HSPA1BP0DMV9 641 aaKnown RBP24.64■■□□□ 1.54
CBLN3-202ENST00000555436 VEGFBP49765 207 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 DEFB115Q30KQ5 88 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 TBC1D10BQ4KMP7 808 aaPredicted RBP24.64■■□□□ 1.54
CBLN3-202ENST00000555436 CST9Q5W186 159 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 RSBN1LQ6PCB5 846 aaPredicted RBP24.64■■□□□ 1.54
CBLN3-202ENST00000555436 LMBR1LQ6UX01 489 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 AGBL3Q8NEM8 1001 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 SSH1Q8WYL5 1049 aa24.64■■□□□ 1.54
CBLN3-202ENST00000555436 GLIS2Q9BZE0 524 aaPredicted RBP24.64■■□□□ 1.54
CBLN3-202ENST00000555436 PTPRCP08575 1304 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 EGFRP00533 1210 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 EPHA10Q5JZY3 1008 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 CDC37L1Q7L3B6 337 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 TRMT2AQ8IZ69 625 aaKnown RBP24.63■■□□□ 1.53
CBLN3-202ENST00000555436 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 SCN9AQ15858 1988 aa24.63■■□□□ 1.53
CBLN3-202ENST00000555436 ZNF804BA4D1E1 1349 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 USP17L3A6NCW0 530 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 USP17L4A6NCW7 530 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 CHRNDQ07001 517 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 USP17L1Q7RTZ2 530 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 COA1Q9GZY4 146 aa24.62■■□□□ 1.53
CBLN3-202ENST00000555436 ZNF280AP59817 542 aaPredicted RBP24.61■■□□□ 1.53
CBLN3-202ENST00000555436 TXNRD3Q86VQ6 643 aa24.61■■□□□ 1.53
CBLN3-202ENST00000555436 GMLQ99445 158 aa24.61■■□□□ 1.53
CBLN3-202ENST00000555436 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
CBLN3-202ENST00000555436 KIF4BQ2VIQ3 1234 aa24.6■■□□□ 1.53
CBLN3-202ENST00000555436 RBM26Q5T8P6 1007 aaKnown RBP24.6■■□□□ 1.53
CBLN3-202ENST00000555436 SPEF2Q9C093 1822 aa24.6■■□□□ 1.53
CBLN3-202ENST00000555436 UTYO14607 1347 aa24.6■■□□□ 1.53
CBLN3-202ENST00000555436 CELF2O95319 508 aaKnown RBP24.59■■□□□ 1.53
CBLN3-202ENST00000555436 ALDH1L2Q3SY69 923 aa24.59■■□□□ 1.53
CBLN3-202ENST00000555436 TLL2Q9Y6L7 1015 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms