RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MMP20O60882 483 aa10.21□□□□□ -0.77
VRK1-205ENST00000555402 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
VRK1-205ENST00000555402 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.77
VRK1-205ENST00000555402 FOXO3O43524 673 aa10.2□□□□□ -0.78
VRK1-205ENST00000555402 HOXD8P13378 290 aaPredicted RBP10.2□□□□□ -0.78
VRK1-205ENST00000555402 WEE1P30291 646 aa10.2□□□□□ -0.78
VRK1-205ENST00000555402 RGL4Q8IZJ4 473 aa10.2□□□□□ -0.78
VRK1-205ENST00000555402 VTI1AQ96AJ9 217 aa10.2□□□□□ -0.78
VRK1-205ENST00000555402 TRIM33Q9UPN9 1127 aa10.2□□□□□ -0.78
VRK1-205ENST00000555402 SOX18P35713 384 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 CACTIN-AS1Q8N1I8 211 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 GLMNQ92990 594 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 MUC3BQ9H195 1237 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 LRFN2Q9ULH4 789 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 PPME1Q9Y570 386 aa10.19□□□□□ -0.78
VRK1-205ENST00000555402 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L21D6R901 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 DHX15O43143 795 aaKnown RBP10.18□□□□□ -0.78
VRK1-205ENST00000555402 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 TREML1Q86YW5 311 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 ZDHHC13Q8IUH4 622 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 ARMC10Q8N2F6 343 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 KCNMB2Q9Y691 235 aa10.18□□□□□ -0.78
VRK1-205ENST00000555402 FAM196BA6NMK8 535 aa10.17□□□□□ -0.78
VRK1-205ENST00000555402 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
VRK1-205ENST00000555402 GALNT11Q8NCW6 608 aa10.17□□□□□ -0.78
VRK1-205ENST00000555402 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
VRK1-205ENST00000555402 NFIAQ12857 509 aa10.16□□□□□ -0.78
VRK1-205ENST00000555402 ARID3AQ99856 593 aa10.16□□□□□ -0.78
VRK1-205ENST00000555402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.16□□□□□ -0.78
VRK1-205ENST00000555402 A6NJR5 290 aa10.15□□□□□ -0.78
VRK1-205ENST00000555402 WISP1O95388 367 aa10.15□□□□□ -0.78
VRK1-205ENST00000555402 SPINK2P20155 84 aa10.15□□□□□ -0.78
VRK1-205ENST00000555402 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
VRK1-205ENST00000555402 CEP41Q9BYV8 373 aa10.15□□□□□ -0.78
VRK1-205ENST00000555402 LINC01387J3KSC0 135 aa10.14□□□□□ -0.79
VRK1-205ENST00000555402 CD68P34810 354 aaPredicted RBP10.14□□□□□ -0.79
VRK1-205ENST00000555402 GRIK1P39086 918 aa10.14□□□□□ -0.79
VRK1-205ENST00000555402 PPP1R12CQ9BZL4 782 aa10.14□□□□□ -0.79
VRK1-205ENST00000555402 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
VRK1-205ENST00000555402 TRIM42Q8IWZ5 723 aa10.13□□□□□ -0.79
VRK1-205ENST00000555402 C7orf69Q9H7B7 122 aa10.13□□□□□ -0.79
VRK1-205ENST00000555402 PRR19A6NJB7 356 aa10.12□□□□□ -0.79
VRK1-205ENST00000555402 UVSSAQ2YD98 709 aa10.12□□□□□ -0.79
VRK1-205ENST00000555402 ACAD11Q709F0 780 aa10.12□□□□□ -0.79
VRK1-205ENST00000555402 NLRP13Q86W25 1043 aa10.12□□□□□ -0.79
VRK1-205ENST00000555402 KCNK4Q9NYG8 393 aa10.12□□□□□ -0.79
VRK1-205ENST00000555402 COX20Q5RI15 118 aa10.11□□□□□ -0.79
VRK1-205ENST00000555402 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
VRK1-205ENST00000555402 DTX1Q86Y01 620 aa10.11□□□□□ -0.79
VRK1-205ENST00000555402 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
VRK1-205ENST00000555402 UTP4Q969X6 686 aaKnown RBP10.11□□□□□ -0.79
VRK1-205ENST00000555402 FAM46AQ96IP4 442 aaKnown RBP10.11□□□□□ -0.79
VRK1-205ENST00000555402 HMX2A2RU54 273 aa10.1□□□□□ -0.79
VRK1-205ENST00000555402 TM4SF5O14894 197 aa10.1□□□□□ -0.79
VRK1-205ENST00000555402 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
VRK1-205ENST00000555402 DBNDD2Q9BQY9 259 aa10.1□□□□□ -0.79
VRK1-205ENST00000555402 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
VRK1-205ENST00000555402 PROSER2Q86WR7 435 aaPredicted RBP10.09□□□□□ -0.79
VRK1-205ENST00000555402 LACRTQ9GZZ8 138 aa10.09□□□□□ -0.79
VRK1-205ENST00000555402 WNT11O96014 354 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 FZD5Q13467 585 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 TRIP4Q15650 581 aaPredicted RBP10.08□□□□□ -0.8
VRK1-205ENST00000555402 LCE1DQ5T752 114 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
VRK1-205ENST00000555402 CEP135Q66GS9 1140 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 OR13H1Q8NG92 308 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 MYRFLQ96LU7 910 aa10.08□□□□□ -0.8
VRK1-205ENST00000555402 LMOD1P29536 600 aaPredicted RBP10.07□□□□□ -0.8
VRK1-205ENST00000555402 CDC27P30260 824 aa10.07□□□□□ -0.8
VRK1-205ENST00000555402 ATP11AP98196 1134 aa10.07□□□□□ -0.8
VRK1-205ENST00000555402 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
VRK1-205ENST00000555402 CDC25BP30305 580 aa10.06□□□□□ -0.8
VRK1-205ENST00000555402 DUOXA2Q1HG44 320 aa10.06□□□□□ -0.8
VRK1-205ENST00000555402 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
VRK1-205ENST00000555402 FAM200AQ8TCP9 573 aa10.06□□□□□ -0.8
VRK1-205ENST00000555402 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
VRK1-205ENST00000555402 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
VRK1-205ENST00000555402 FSCN2O14926 492 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
VRK1-205ENST00000555402 HYAL2Q12891 473 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 ADAMTSL4Q6UY14 1074 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 KLHL23Q8NBE8 558 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 SPACA7Q96KW9 195 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
VRK1-205ENST00000555402 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
VRK1-205ENST00000555402 UBAP1LF5GYI3 381 aa10.04□□□□□ -0.8
VRK1-205ENST00000555402 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms