RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 PSME1Q06323 249 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 TSGA10IPQ3SY00 556 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 FSD1Q9BTV5 496 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 DDX21Q9NR30 783 aaKnown RBP eCLIP18.77■□□□□ 0.6
MARK3-209ENST00000555235 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 CCDC69A6NI79 296 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 BECN2A8MW95 431 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 RESTQ13127 1097 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 FBXO38Q6PIJ6 1188 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
MARK3-209ENST00000555235 LMTK3Q96Q04 1460 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 GSDMDP57764 484 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 CCZ1BP86790 482 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 CCZ1P86791 482 aaPredicted RBP18.76■□□□□ 0.59
MARK3-209ENST00000555235 PDIA6Q15084 440 aa18.76■□□□□ 0.59
MARK3-209ENST00000555235 MRC1P22897 1456 aa18.75■□□□□ 0.59
MARK3-209ENST00000555235 IGKV5-2P06315 115 aa18.75■□□□□ 0.59
MARK3-209ENST00000555235 ELF2Q15723 593 aa18.75■□□□□ 0.59
MARK3-209ENST00000555235 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
MARK3-209ENST00000555235 TCEANC2Q96MN5 208 aa18.75■□□□□ 0.59
MARK3-209ENST00000555235 C11orf57Q6ZUT1 292 aaPredicted RBP18.75■□□□□ 0.59
MARK3-209ENST00000555235 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 H3BQV1 296 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 KRT32Q14532 448 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
MARK3-209ENST00000555235 BBXQ8WY36 941 aaPredicted RBP18.74■□□□□ 0.59
MARK3-209ENST00000555235 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
MARK3-209ENST00000555235 SIPA1L3O60292 1781 aaPredicted RBP18.74■□□□□ 0.59
MARK3-209ENST00000555235 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
MARK3-209ENST00000555235 ARID5BQ14865 1188 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 SIL1Q9H173 461 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 ANO10Q9NW15 660 aa18.74■□□□□ 0.59
MARK3-209ENST00000555235 TAF5LO75529 589 aa18.73■□□□□ 0.59
MARK3-209ENST00000555235 STK3Q13188 491 aa18.73■□□□□ 0.59
MARK3-209ENST00000555235 USPL1Q5W0Q7 1092 aa18.73■□□□□ 0.59
MARK3-209ENST00000555235 BRF1Q92994 677 aa18.73■□□□□ 0.59
MARK3-209ENST00000555235 TIGD1Q96MW7 591 aa18.73■□□□□ 0.59
MARK3-209ENST00000555235 GCP02774 474 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 BMS1Q14692 1282 aaKnown RBP18.72■□□□□ 0.59
MARK3-209ENST00000555235 ESCO1Q5FWF5 840 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 FILIP1Q7Z7B0 1213 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 CALCOCO1Q9P1Z2 691 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.72■□□□□ 0.59
MARK3-209ENST00000555235 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 V9GYY5 206 aaPredicted RBP18.72■□□□□ 0.59
MARK3-209ENST00000555235 TUBB4AP04350 444 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 KLHDC4Q8TBB5 520 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 TMEM51Q9NW97 253 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
MARK3-209ENST00000555235 CCDC73Q6ZRK6 1079 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 CEP57L1Q8IYX8 460 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 NAT10Q9H0A0 1025 aaKnown RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 TRMT1Q9NXH9 659 aaKnown RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 SLIT3O75094 1523 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 ERBB3P21860 1342 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 DHX8Q14562 1220 aaKnown RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 DHX40Q8IX18 779 aaKnown RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
MARK3-209ENST00000555235 L2HGDHQ9H9P8 463 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
MARK3-209ENST00000555235 JAK2O60674 1132 aa18.7■□□□□ 0.58
MARK3-209ENST00000555235 KINO60870 393 aaKnown RBP18.7■□□□□ 0.58
MARK3-209ENST00000555235 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
MARK3-209ENST00000555235 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
MARK3-209ENST00000555235 H2AFXP16104 143 aaPredicted RBP18.7■□□□□ 0.58
MARK3-209ENST00000555235 ATP5JP18859 108 aa18.7■□□□□ 0.58
MARK3-209ENST00000555235 SNW1Q13573 536 aaKnown RBP18.7■□□□□ 0.58
MARK3-209ENST00000555235 GCKRQ14397 625 aa18.7■□□□□ 0.58
MARK3-209ENST00000555235 ATL3Q6DD88 541 aa18.7■□□□□ 0.58
MARK3-209ENST00000555235 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
MARK3-209ENST00000555235 COL15A1P39059 1388 aa18.69■□□□□ 0.58
MARK3-209ENST00000555235 KCNJ6P48051 423 aa18.69■□□□□ 0.58
MARK3-209ENST00000555235 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
MARK3-209ENST00000555235 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
MARK3-209ENST00000555235 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
MARK3-209ENST00000555235 COPRSQ9NQ92 184 aa18.69■□□□□ 0.58
MARK3-209ENST00000555235 PSDA5PKW4 1024 aaPredicted RBP18.68■□□□□ 0.58
MARK3-209ENST00000555235 CDK11BP21127 795 aaKnown RBP18.68■□□□□ 0.58
MARK3-209ENST00000555235 FAM160A1Q05DH4 1040 aa18.68■□□□□ 0.58
MARK3-209ENST00000555235 NEXNQ0ZGT2 675 aa18.68■□□□□ 0.58
MARK3-209ENST00000555235 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
MARK3-209ENST00000555235 CCDC150Q8NCX0 1101 aa18.68■□□□□ 0.58
MARK3-209ENST00000555235 ZNF446Q9NWS9 450 aa18.68■□□□□ 0.58
MARK3-209ENST00000555235 NRDCO43847 1150 aa18.67■□□□□ 0.58
MARK3-209ENST00000555235 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
MARK3-209ENST00000555235 NEK1Q96PY6 1258 aa18.67■□□□□ 0.58
MARK3-209ENST00000555235 NOL10Q9BSC4 688 aaKnown RBP18.67■□□□□ 0.58
MARK3-209ENST00000555235 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
MARK3-209ENST00000555235 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
MARK3-209ENST00000555235 ADD1P35611 737 aaKnown RBP18.67■□□□□ 0.58
MARK3-209ENST00000555235 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
MARK3-209ENST00000555235 DDX11Q96FC9 970 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms