RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ANKRD18BA2A2Z9 1011 aa10.8□□□□□ -0.68
TDP1-210ENST00000554976 NECTIN1Q15223 517 aa10.8□□□□□ -0.68
TDP1-210ENST00000554976 CWC27Q6UX04 472 aaKnown RBP10.8□□□□□ -0.68
TDP1-210ENST00000554976 NIP7Q9Y221 180 aaKnown RBP eCLIP10.8□□□□□ -0.68
TDP1-210ENST00000554976 HIP1O00291 1037 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 HSCBQ8IWL3 235 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 SNX14Q9Y5W7 946 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 CCDC171Q6TFL3 1326 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 CHGBP05060 677 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 USPL1Q5W0Q7 1092 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 ZNF589Q86UQ0 364 aaPredicted RBP10.79□□□□□ -0.68
TDP1-210ENST00000554976 MAP4K1Q92918 833 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 TTC14Q96N46 770 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 ANO2Q9NQ90 1003 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
TDP1-210ENST00000554976 SF3B3Q15393 1217 aaKnown RBP10.79□□□□□ -0.68
TDP1-210ENST00000554976 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 KBTBD3Q8NAB2 608 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 IL27Q8NEV9 243 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
TDP1-210ENST00000554976 COL11A2P13942 1736 aaPredicted RBP10.79□□□□□ -0.68
TDP1-210ENST00000554976 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
TDP1-210ENST00000554976 TIAM2Q8IVF5 1701 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 ERFEQ4G0M1 354 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
TDP1-210ENST00000554976 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
TDP1-210ENST00000554976 AKAP2Q9Y2D5 859 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 MROH5Q6ZUA9 1318 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 CHD4Q14839 1912 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 PDE8BO95263 885 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 ARID4AP29374 1257 aaPredicted RBP10.78□□□□□ -0.68
TDP1-210ENST00000554976 SCARF1Q14162 830 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 SEC31BQ9NQW1 1179 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 DIAPH3Q9NSV4 1193 aa10.78□□□□□ -0.68
TDP1-210ENST00000554976 A0A0G2JS52 829 aa10.77□□□□□ -0.68
TDP1-210ENST00000554976 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.68
TDP1-210ENST00000554976 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.68
TDP1-210ENST00000554976 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.68
TDP1-210ENST00000554976 GNPATO15228 680 aa10.77□□□□□ -0.69
TDP1-210ENST00000554976 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.69
TDP1-210ENST00000554976 KRT27Q7Z3Y8 459 aa10.77□□□□□ -0.69
TDP1-210ENST00000554976 PROM2Q8N271 834 aa10.77□□□□□ -0.69
TDP1-210ENST00000554976 RUFY2Q8WXA3 655 aa10.77□□□□□ -0.69
TDP1-210ENST00000554976 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.69
TDP1-210ENST00000554976 COL1A1P02452 1464 aaPredicted RBP10.77□□□□□ -0.69
TDP1-210ENST00000554976 TAF5LO75529 589 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 SLC27A3Q5K4L6 730 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 ARXQ96QS3 562 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 FSD1Q9BTV5 496 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 FOXP2O15409 715 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 ZMYM1Q5SVZ6 1142 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 LDHAL6AQ6ZMR3 332 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 IRS2Q9Y4H2 1338 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 TM4SF1P30408 202 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 MCAMP43121 646 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 CUL4AQ13619 759 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 ATP2B3Q16720 1220 aa10.76□□□□□ -0.69
TDP1-210ENST00000554976 ZBTB22O15209 634 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 ADRA2BP18089 450 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 MCCP23508 829 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 COL9A3Q14050 684 aaPredicted RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
TDP1-210ENST00000554976 METTL24Q5JXM2 366 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 TM6SF1Q9BZW5 370 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 HELLSQ9NRZ9 838 aa10.75□□□□□ -0.69
TDP1-210ENST00000554976 PUM3Q15397 648 aaKnown RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 ADCK5Q3MIX3 580 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 SEC62Q99442 399 aaKnown RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 RGS17Q9UGC6 210 aaPredicted RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 CARMIL3Q8ND23 1372 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 GOLIM4O00461 696 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 SLC27A2O14975 620 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 SSFA2P28290 1259 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 TAF6LQ9Y6J9 622 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 LAMB1P07942 1786 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 ZNF804BA4D1E1 1349 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 MAST3O60307 1309 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 LPIN2Q92539 896 aa10.74□□□□□ -0.69
TDP1-210ENST00000554976 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
TDP1-210ENST00000554976 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms