RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 PCSK2P16519 638 aa6.94□□□□□ -1.3
CFAP54-207ENST00000554821 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
CFAP54-207ENST00000554821 SAP130Q9H0E3 1048 aa6.94□□□□□ -1.3
CFAP54-207ENST00000554821 SRA1Q9HD15 236 aaKnown RBP6.94□□□□□ -1.3
CFAP54-207ENST00000554821 NAGPAQ9UK23 515 aa6.94□□□□□ -1.3
CFAP54-207ENST00000554821 KCNMB2Q9Y691 235 aa6.94□□□□□ -1.3
CFAP54-207ENST00000554821 UBAP1LF5GYI3 381 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 TNFRSF10BO14763 440 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 CPB1P15086 417 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 TARSP26639 723 aaKnown RBP6.93□□□□□ -1.3
CFAP54-207ENST00000554821 ZAP70P43403 619 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 AFF1P51825 1210 aaKnown RBP6.93□□□□□ -1.3
CFAP54-207ENST00000554821 B4GALNT3Q6L9W6 998 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
CFAP54-207ENST00000554821 A0A0A0MRY4 1105 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 GHRHP01286 108 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 EIF2AK2P19525 551 aaKnown RBP6.92□□□□□ -1.3
CFAP54-207ENST00000554821 MSL1Q68DK7 614 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 HELQQ8TDG4 1101 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 LPIN3Q9BQK8 851 aa6.92□□□□□ -1.3
CFAP54-207ENST00000554821 NAA30Q147X3 362 aaPredicted RBP6.91□□□□□ -1.3
CFAP54-207ENST00000554821 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
CFAP54-207ENST00000554821 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
CFAP54-207ENST00000554821 C8orf86Q6ZUL3 223 aa6.91□□□□□ -1.3
CFAP54-207ENST00000554821 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
CFAP54-207ENST00000554821 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
CFAP54-207ENST00000554821 MUC3BQ9H195 1237 aa6.91□□□□□ -1.3
CFAP54-207ENST00000554821 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
CFAP54-207ENST00000554821 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
CFAP54-207ENST00000554821 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
CFAP54-207ENST00000554821 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
CFAP54-207ENST00000554821 SPACA7Q96KW9 195 aa6.9□□□□□ -1.3
CFAP54-207ENST00000554821 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
CFAP54-207ENST00000554821 LOC102724428A0A0B4J2F2 783 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 MMP20O60882 483 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 SIK1P57059 783 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 HYAL2Q12891 473 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 TRIP4Q15650 581 aaPredicted RBP6.89□□□□□ -1.31
CFAP54-207ENST00000554821 ILDR2Q71H61 639 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 FBXO11Q86XK2 927 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
CFAP54-207ENST00000554821 SMG9Q9H0W8 520 aaKnown RBP6.89□□□□□ -1.31
CFAP54-207ENST00000554821 TMEM88BA6NKF7 163 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 SSFA2P28290 1259 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 PDE4CQ08493 712 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 ADGRE1Q14246 886 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 TXNRD3Q86VQ6 643 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 USP20Q9Y2K6 914 aa6.88□□□□□ -1.31
CFAP54-207ENST00000554821 MLLT1Q03111 559 aaPredicted RBP6.87□□□□□ -1.31
CFAP54-207ENST00000554821 GRIK5Q16478 980 aa6.87□□□□□ -1.31
CFAP54-207ENST00000554821 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
CFAP54-207ENST00000554821 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
CFAP54-207ENST00000554821 GPR152Q8TDT2 470 aa6.87□□□□□ -1.31
CFAP54-207ENST00000554821 ABI2Q9NYB9 513 aaPredicted RBP6.87□□□□□ -1.31
CFAP54-207ENST00000554821 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 USP5P45974 858 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
CFAP54-207ENST00000554821 MBTPS1Q14703 1052 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 GRIK4Q16099 956 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 CAPN12Q6ZSI9 719 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
CFAP54-207ENST00000554821 SLAIN2Q9P270 581 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 SEPT3Q9UH03 358 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 USP21Q9UK80 565 aa6.86□□□□□ -1.31
CFAP54-207ENST00000554821 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
CFAP54-207ENST00000554821 FAM13AO94988 1023 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 SELPP16109 830 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
CFAP54-207ENST00000554821 SCNN1AP37088 669 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 EHHADHQ08426 723 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 XKR5Q6UX68 686 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
CFAP54-207ENST00000554821 KIF4AO95239 1232 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 H2AFB2P0C5Z0 115 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 NPR3P17342 541 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 HFE2Q6ZVN8 426 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 ZNF438Q7Z4V0 828 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 GTF3C2Q8WUA4 911 aaPredicted RBP6.84□□□□□ -1.31
CFAP54-207ENST00000554821 NUDT16Q96DE0 195 aaKnown RBP6.84□□□□□ -1.31
CFAP54-207ENST00000554821 C1orf115Q9H7X2 142 aa6.84□□□□□ -1.31
CFAP54-207ENST00000554821 J3QW42 95 aa6.83□□□□□ -1.32
CFAP54-207ENST00000554821 FAM26DQ5JW98 314 aa6.83□□□□□ -1.32
CFAP54-207ENST00000554821 ELP3Q9H9T3 547 aa6.83□□□□□ -1.32
CFAP54-207ENST00000554821 ZBTB39O15060 712 aa6.82□□□□□ -1.32
CFAP54-207ENST00000554821 EIF1AXP47813 144 aaKnown RBP6.82□□□□□ -1.32
CFAP54-207ENST00000554821 IL22RA1Q8N6P7 574 aa6.82□□□□□ -1.32
CFAP54-207ENST00000554821 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
CFAP54-207ENST00000554821 EGFL7Q9UHF1 273 aa6.82□□□□□ -1.32
CFAP54-207ENST00000554821 DLL1O00548 723 aa6.81□□□□□ -1.32
CFAP54-207ENST00000554821 PDGFAP04085 211 aa6.81□□□□□ -1.32
CFAP54-207ENST00000554821 MPSTP25325 297 aa6.81□□□□□ -1.32
CFAP54-207ENST00000554821 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
CFAP54-207ENST00000554821 FAM117BQ6P1L5 589 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms