RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PSAPL1Q6NUJ1 521 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 ZNF417Q8TAU3 575 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 SNX29Q8TEQ0 813 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 DMRTB1Q96MA1 342 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
SCFD1-214ENST00000554819 ZNF587Q96SQ5 575 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-214ENST00000554819 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 GNB5O14775 395 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 PHACTR2O75167 634 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 ALBP02768 609 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-214ENST00000554819 EIF2AK2P19525 551 aaKnown RBP7.31□□□□□ -1.24
SCFD1-214ENST00000554819 CES1P23141 567 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 LINC00114Q6XXX2 140 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 NCAPG2Q86XI2 1143 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 TTC9Q92623 222 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 FAM129BQ96TA1 746 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 JPH1Q9HDC5 661 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-214ENST00000554819 CNTN3Q9P232 1028 aa7.31□□□□□ -1.24
SCFD1-214ENST00000554819 J3QW42 95 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 KIF4AO95239 1232 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 MAPK1P28482 360 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 PERM1Q5SV97 790 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 NAGPAQ9UK23 515 aa7.3□□□□□ -1.24
SCFD1-214ENST00000554819 CYP2E1P05181 493 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-214ENST00000554819 SND1Q7KZF4 910 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCFD1-214ENST00000554819 ZSCAN29Q8IWY8 852 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-214ENST00000554819 LPIN3Q9BQK8 851 aa7.29□□□□□ -1.24
SCFD1-214ENST00000554819 SMG9Q9H0W8 520 aaKnown RBP7.29□□□□□ -1.24
SCFD1-214ENST00000554819 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
SCFD1-214ENST00000554819 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
SCFD1-214ENST00000554819 SPDYE3A6NKU9 549 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 CACTIN-AS1Q8N1I8 211 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 ZFYVE28Q9HCC9 887 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 KANSL3Q9P2N6 904 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 FOXD3Q9UJU5 478 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-214ENST00000554819 AMOTL2Q9Y2J4 779 aa7.28□□□□□ -1.24
SCFD1-214ENST00000554819 ZBTB7CA1YPR0 619 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 SMNDC1O75940 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCFD1-214ENST00000554819 EDN3P14138 238 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 AFF1P51825 1210 aaKnown RBP7.27□□□□□ -1.25
SCFD1-214ENST00000554819 COL13A1Q5TAT6 717 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-214ENST00000554819 C8orf86Q6ZUL3 223 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 TMC7Q7Z402 723 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
SCFD1-214ENST00000554819 NIF3L1Q9GZT8 377 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 CHRDQ9H2X0 955 aa7.27□□□□□ -1.25
SCFD1-214ENST00000554819 EREGO14944 169 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 IRS1P35568 1242 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 KCNMA1Q12791 1236 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 ALYREFQ86V81 257 aaKnown RBP7.26□□□□□ -1.25
SCFD1-214ENST00000554819 CEP120Q8N960 986 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 PLVAPQ9BX97 442 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
SCFD1-214ENST00000554819 GPR182O15218 404 aa7.25□□□□□ -1.25
SCFD1-214ENST00000554819 CPNE3O75131 537 aaKnown RBP7.25□□□□□ -1.25
SCFD1-214ENST00000554819 IGHA2P01877 340 aa7.25□□□□□ -1.25
SCFD1-214ENST00000554819 NID1P14543 1247 aa7.25□□□□□ -1.25
SCFD1-214ENST00000554819 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
SCFD1-214ENST00000554819 PBX4Q9BYU1 374 aa7.25□□□□□ -1.25
SCFD1-214ENST00000554819 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-214ENST00000554819 COL9A3Q14050 684 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-214ENST00000554819 GRIK5Q16478 980 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 TRAPPC3LQ5T215 181 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 MSL1Q68DK7 614 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 WFDC8Q8IUA0 241 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 ASB16Q96NS5 453 aa7.24□□□□□ -1.25
SCFD1-214ENST00000554819 FAM177BA6PVY3 158 aa7.23□□□□□ -1.25
SCFD1-214ENST00000554819 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
SCFD1-214ENST00000554819 PRRT3Q5FWE3 981 aa7.23□□□□□ -1.25
SCFD1-214ENST00000554819 GDF6Q6KF10 455 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-214ENST00000554819 GALNT12Q8IXK2 581 aa7.23□□□□□ -1.25
SCFD1-214ENST00000554819 CSRNP1Q96S65 589 aa7.23□□□□□ -1.25
SCFD1-214ENST00000554819 RASSF4Q9H2L5 321 aa7.23□□□□□ -1.25
SCFD1-214ENST00000554819 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 EIF1AYO14602 144 aaKnown RBP7.22□□□□□ -1.25
SCFD1-214ENST00000554819 TREHO43280 583 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 ATP11AP98196 1134 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 RASSF7Q02833 373 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 ORC1Q13415 861 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 DSC3Q14574 896 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 IL22RA1Q8N6P7 574 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 OSMRQ99650 979 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 MUC3BQ9H195 1237 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 SUV39H2Q9H5I1 410 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 DZANK1Q9NVP4 752 aa7.22□□□□□ -1.25
SCFD1-214ENST00000554819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-214ENST00000554819 PDE2AO00408 941 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-214ENST00000554819 POLR3DP05423 398 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-214ENST00000554819 RAC1P63000 192 aa7.21□□□□□ -1.26
SCFD1-214ENST00000554819 DMRTC2Q8IXT2 367 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms