RNA–Protein interactions for RNA: ENST00000554814.1

AL355838.1-201, humanhuman

TSL 4 BASIC

Gene AL355838.1, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355838.1-201ENST00000554814 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.86
AL355838.1-201ENST00000554814 EML3Q32P44 896 aa9.7□□□□□ -0.86
AL355838.1-201ENST00000554814 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
AL355838.1-201ENST00000554814 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
AL355838.1-201ENST00000554814 ATRNO75882 1429 aa9.7□□□□□ -0.86
AL355838.1-201ENST00000554814 NAIPQ13075 1403 aa9.7□□□□□ -0.86
AL355838.1-201ENST00000554814 RGPD8O14715 1765 aaPredicted RBP9.69□□□□□ -0.86
AL355838.1-201ENST00000554814 EPHA4P54764 986 aa9.69□□□□□ -0.86
AL355838.1-201ENST00000554814 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
AL355838.1-201ENST00000554814 PMFBP1Q8TBY8 1022 aa9.69□□□□□ -0.86
AL355838.1-201ENST00000554814 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 A6NJY4 79 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 ZBTB7BO15156 539 aaPredicted RBP9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 FOXR1Q6PIV2 292 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 CRISPLD1Q9H336 500 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
AL355838.1-201ENST00000554814 CDK2AP1O14519 115 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 CLDN10P78369 228 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 ZDHHC1Q8WTX9 485 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 TRERF1Q96PN7 1200 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 HIRIP3Q9BW71 556 aaPredicted RBP9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 CFHR5Q9BXR6 569 aa9.67□□□□□ -0.86
AL355838.1-201ENST00000554814 PXDNQ92626 1479 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 PPLO60437 1756 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 C2CD2LO14523 706 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 BNIP3LO60238 219 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 MX2P20592 715 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 FOXK2Q01167 660 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 USP17L2Q6R6M4 530 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 C1orf229Q6ZS94 237 aaPredicted RBP9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 UNC5CLQ8IV45 518 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 KLRG1Q96E93 195 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 NIFKQ9BYG3 293 aaKnown RBP9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 MYOM2P54296 1465 aa9.66□□□□□ -0.86
AL355838.1-201ENST00000554814 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 FAM83GA6ND36 823 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 LZTS3O60299 673 aaPredicted RBP9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 DKK1O94907 266 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 LBRQ14739 615 aaKnown RBP9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 GLI3P10071 1580 aa9.65□□□□□ -0.86
AL355838.1-201ENST00000554814 RALGAPBQ86X10 1494 aa9.65□□□□□ -0.87
AL355838.1-201ENST00000554814 SPATA31A3Q5VYP0 1347 aa9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 RASSF7Q02833 373 aa9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 SCHIP1Q9P0W5 487 aaPredicted RBP9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 PARP3Q9Y6F1 533 aa9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 MARF1Q9Y4F3 1742 aaKnown RBP9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 PTCH1Q13635 1447 aa9.64□□□□□ -0.87
AL355838.1-201ENST00000554814 ATP9BO43861 1147 aa9.63□□□□□ -0.87
AL355838.1-201ENST00000554814 BCRP11274 1271 aa9.63□□□□□ -0.87
AL355838.1-201ENST00000554814 CTBSQ01459 385 aa9.63□□□□□ -0.87
AL355838.1-201ENST00000554814 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
AL355838.1-201ENST00000554814 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
AL355838.1-201ENST00000554814 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 PSME1Q06323 249 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 SH3PXD2AQ5TCZ1 1133 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 PGBD3Q8N328 593 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 ZCCHC2Q9C0B9 1178 aaKnown RBP9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 LAMC1P11047 1609 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 COL22A1Q8NFW1 1626 aaPredicted RBP9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
AL355838.1-201ENST00000554814 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 TXLNAP40222 546 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 TNS4Q8IZW8 715 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 C7orf43Q8WVR3 580 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 GLMNQ92990 594 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 ZIC5Q96T25 663 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 BTG4Q9NY30 223 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
AL355838.1-201ENST00000554814 RRBP1Q9P2E9 1410 aaKnown RBP9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 A0A1W2PNR3 127 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 IRS1P35568 1242 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 CHRNA2Q15822 529 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 C1orf216Q8TAB5 229 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 AIDAQ96BJ3 306 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 OXCT2Q9BYC2 517 aaPredicted RBP9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 SLIT2O94813 1529 aa9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
AL355838.1-201ENST00000554814 YTHDC2Q9H6S0 1430 aaKnown RBP9.59□□□□□ -0.87
AL355838.1-201ENST00000554814 OIP5O43482 229 aa9.59□□□□□ -0.87
AL355838.1-201ENST00000554814 FGFR3P22607 806 aa9.59□□□□□ -0.87
AL355838.1-201ENST00000554814 SF3B2Q13435 895 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms