RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 IGHDP01880 384 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 CLCN1P35523 988 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 GNAI1P63096 354 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-230ENST00000554673 MARCH10Q8NA82 808 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-230ENST00000554673 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-230ENST00000554673 ANKRD36CQ5JPF3 1778 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 ZNF831Q5JPB2 1677 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-230ENST00000554673 PLEKHO1Q53GL0 409 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-230ENST00000554673 TOM1L2Q6ZVM7 507 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 ZNF496Q96IT1 587 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-230ENST00000554673 MYH16Q9H6N6 1097 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 PRDM9Q9NQV7 894 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 NOB1Q9ULX3 412 aaKnown RBP7.55□□□□□ -1.2
ATXN3-230ENST00000554673 ADCY9O60503 1353 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
ATXN3-230ENST00000554673 NUP98P52948 1817 aa7.55□□□□□ -1.2
ATXN3-230ENST00000554673 BCL9O00512 1426 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 BCORQ6W2J9 1755 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 WIPF1O43516 503 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 IGSF3O75054 1194 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 IL2RBP14784 551 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 TATP17735 454 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 PIP4K2AP48426 406 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 NBPF10Q6P3W6 841 aaKnown RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 SIRT2Q8IXJ6 389 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 NBPF15Q8N660 670 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 NFATC2IPQ8NCF5 419 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 BANK1Q8NDB2 785 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 USP35Q9P2H5 1018 aa7.54□□□□□ -1.2
ATXN3-230ENST00000554673 RGS17Q9UGC6 210 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-230ENST00000554673 C4AP0C0L4 1744 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 C4BP0C0L5 1744 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 F6X3S4 739 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 FMNL1O95466 1100 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 OATP04181 439 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 FUT2Q10981 343 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 FAM160A2Q8N612 972 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 ZCRB1Q8TBF4 217 aaKnown RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 PHAXQ9H814 394 aaKnown RBP7.53□□□□□ -1.2
ATXN3-230ENST00000554673 ATP13A2Q9NQ11 1180 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 TSPYL4Q9UJ04 414 aa7.53□□□□□ -1.2
ATXN3-230ENST00000554673 SSTR3P32745 418 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-230ENST00000554673 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-230ENST00000554673 LMOD3Q0VAK6 560 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 ALDH1L2Q3SY69 923 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 AMOTQ4VCS5 1084 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 MORN1Q5T089 497 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 FAM182BQ5T319 152 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 PIGBQ92521 554 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 PNNQ9H307 717 aaKnown RBP7.52□□□□□ -1.21
ATXN3-230ENST00000554673 SNRKQ9NRH2 765 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 SMC4Q9NTJ3 1288 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 ASAP1Q9ULH1 1129 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 ZNF330Q9Y3S2 320 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-230ENST00000554673 USP16Q9Y5T5 823 aa7.52□□□□□ -1.21
ATXN3-230ENST00000554673 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 TERTO14746 1132 aaKnown RBP7.51□□□□□ -1.21
ATXN3-230ENST00000554673 KCNQ2O43526 872 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 CT47B1P0C2W7 299 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-230ENST00000554673 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 VPS72Q15906 364 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 ATF7IPQ6VMQ6 1270 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 UNC5CLQ8IV45 518 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 FRAT1Q92837 279 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-230ENST00000554673 C8orf37Q96NL8 207 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 BEGAINQ9BUH8 593 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 ATG3Q9NT62 314 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 TAF1P21675 1872 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 A0A1B0GUL6 1792 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 LAMB2P55268 1798 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 AFF2P51816 1311 aa7.51□□□□□ -1.21
ATXN3-230ENST00000554673 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
ATXN3-230ENST00000554673 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-230ENST00000554673 SMPD1P17405 629 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 ZNF790Q6PG37 636 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
ATXN3-230ENST00000554673 IFNL2Q8IZJ0 200 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms