RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 COL4A1P02462 1669 aa11.9□□□□□ -0.5
MARK3-208ENST00000554627 LTBP1Q14766 1721 aa11.9□□□□□ -0.51
MARK3-208ENST00000554627 SRGNP10124 158 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 NUCB1Q02818 461 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 C2CD5Q86YS7 1000 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
MARK3-208ENST00000554627 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
MARK3-208ENST00000554627 MYH7P12883 1935 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 CHD4Q14839 1912 aa11.89□□□□□ -0.51
MARK3-208ENST00000554627 BBOX1O75936 387 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 TGFB2P61812 414 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 RPS8P62241 208 aaKnown RBP11.88□□□□□ -0.51
MARK3-208ENST00000554627 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
MARK3-208ENST00000554627 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
MARK3-208ENST00000554627 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 APBB1O00213 710 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 PTGER2P43116 358 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 METTL24Q5JXM2 366 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
MARK3-208ENST00000554627 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
MARK3-208ENST00000554627 ZNF609O15014 1411 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 ATG9AQ7Z3C6 839 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■□□□□ 9.2
MARK3-208ENST00000554627 ANKRD2Q9GZV1 360 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
MARK3-208ENST00000554627 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
MARK3-208ENST00000554627 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
MARK3-208ENST00000554627 SASH1O94885 1247 aa11.86□□□□□ -0.51
MARK3-208ENST00000554627 PUS3Q9BZE2 481 aaKnown RBP11.86□□□□□ -0.51
MARK3-208ENST00000554627 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
MARK3-208ENST00000554627 CHRNDQ07001 517 aa11.85□□□□□ -0.51
MARK3-208ENST00000554627 TFCP2Q12800 502 aa11.85□□□□□ -0.51
MARK3-208ENST00000554627 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
MARK3-208ENST00000554627 AKAP11Q9UKA4 1901 aa11.85□□□□□ -0.51
MARK3-208ENST00000554627 PDE8BO95263 885 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 IFIT2P09913 472 aaKnown RBP11.84□□□□□ -0.51
MARK3-208ENST00000554627 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
MARK3-208ENST00000554627 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 IL1RAPL2Q9NP60 686 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
MARK3-208ENST00000554627 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 XDHP47989 1333 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
MARK3-208ENST00000554627 SLC5A1P13866 664 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 CHRNA5P30532 468 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 KCNJ4P48050 445 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
MARK3-208ENST00000554627 AACSQ86V21 672 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 SP8Q8IXZ3 490 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 ATP6V0A2Q9Y487 856 aa11.84□□□□□ -0.51
MARK3-208ENST00000554627 PSME4Q14997 1843 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
MARK3-208ENST00000554627 DPEP1P16444 411 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
MARK3-208ENST00000554627 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 LPIN2Q92539 896 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 PIM2Q9P1W9 311 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
MARK3-208ENST00000554627 AOX1Q06278 1338 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 DOCK2Q92608 1830 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
MARK3-208ENST00000554627 MX1P20591 662 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 UBE4AQ14139 1066 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 LEMD3Q9Y2U8 911 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 MYO5AQ9Y4I1 1855 aaKnown RBP11.82□□□□□ -0.52
MARK3-208ENST00000554627 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
MARK3-208ENST00000554627 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 ERC2O15083 957 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 GORABQ5T7V8 394 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
MARK3-208ENST00000554627 NEUROD6Q96NK8 337 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 DUOX1Q9NRD9 1551 aa11.81□□□□□ -0.52
MARK3-208ENST00000554627 TAF5LO75529 589 aa11.8□□□□□ -0.52
MARK3-208ENST00000554627 ATP2B4P23634 1241 aa11.8□□□□□ -0.52
MARK3-208ENST00000554627 RGS3P49796 1198 aa11.8□□□□□ -0.52
MARK3-208ENST00000554627 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
MARK3-208ENST00000554627 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
MARK3-208ENST00000554627 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
MARK3-208ENST00000554627 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
MARK3-208ENST00000554627 ZNF804BA4D1E1 1349 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 375.5 ms