RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 FUCA2Q9BTY2 467 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 NUP62CLQ9H1M0 184 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 MRC1P22897 1456 aa18.57■□□□□ 0.56
ARHGEF40-203ENST00000554514 AP5Z1O43299 807 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 BICD2Q8TD16 824 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 UQCRHLA0A096LP55 91 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 UQCRHP07919 91 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 CCDC192P0DO97 292 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 HSPA2P54652 639 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 CADPS2Q86UW7 1296 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 SPATA31A3Q5VYP0 1347 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 H7C1W4 665 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 MAP3K11Q16584 847 aa18.56■□□□□ 0.56
ARHGEF40-203ENST00000554514 JCADQ9P266 1359 aa18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 SCRN1Q12765 414 aa18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 IFIT1P09914 478 aaKnown RBP18.55■□□□□ 0.56
ARHGEF40-203ENST00000554514 HSP90AB3PQ58FF7 597 aa18.54■□□□□ 0.56
ARHGEF40-203ENST00000554514 FAM13BQ9NYF5 915 aa18.54■□□□□ 0.56
ARHGEF40-203ENST00000554514 COL18A1P39060 1754 aa18.54■□□□□ 0.56
ARHGEF40-203ENST00000554514 NCOA5Q9HCD5 579 aaKnown RBP18.54■□□□□ 0.56
ARHGEF40-203ENST00000554514 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
ARHGEF40-203ENST00000554514 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 GUCY1B3Q02153 619 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 LUZP1Q86V48 1076 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 GORABQ5T7V8 394 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 ALDH8A1Q9H2A2 487 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 PCDH11XQ9BZA7 1347 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 PCDH11YQ9BZA8 1340 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 TYRO3Q06418 890 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 TTLL5Q6EMB2 1281 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 TAOK2Q9UL54 1235 aa18.53■□□□□ 0.56
ARHGEF40-203ENST00000554514 NR1I2O75469 434 aa18.52■□□□□ 0.56
ARHGEF40-203ENST00000554514 ARID3AQ99856 593 aa18.52■□□□□ 0.56
ARHGEF40-203ENST00000554514 EYA2O00167 538 aa18.52■□□□□ 0.55
ARHGEF40-203ENST00000554514 RRP9O43818 475 aaKnown RBP18.52■□□□□ 0.55
ARHGEF40-203ENST00000554514 IL15P40933 162 aaPredicted RBP18.52■□□□□ 0.55
ARHGEF40-203ENST00000554514 HAND2P61296 217 aa18.51■□□□□ 0.55
ARHGEF40-203ENST00000554514 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
ARHGEF40-203ENST00000554514 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
ARHGEF40-203ENST00000554514 ANO6Q4KMQ2 910 aa18.51■□□□□ 0.55
ARHGEF40-203ENST00000554514 HSPD1P10809 573 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 ADORA1P30542 326 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 RESTQ13127 1097 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 ELP1O95163 1332 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 M0R2C6 588 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 MAST3O60307 1309 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 E7EWF7 191 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
ARHGEF40-203ENST00000554514 WDR17Q8IZU2 1322 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 PTPDC1A2A3K4 754 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 NOLC1Q14978 699 aaKnown RBP eCLIP18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 RAB11FIP4Q86YS3 637 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 CEP126Q9P2H0 1117 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 FAM200AQ8TCP9 573 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 GPHNQ9NQX3 736 aaPredicted RBP18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 HELLSQ9NRZ9 838 aa18.49■□□□□ 0.55
ARHGEF40-203ENST00000554514 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 EVA1CP58658 441 aa18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 NSUN7Q8NE18 718 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 STRCP1A6NGW2 1772 aa18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 PDIA4P13667 645 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
ARHGEF40-203ENST00000554514 IL2RBP14784 551 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 DRC7Q8IY82 874 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 PFKFB2O60825 505 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 SASS6Q6UVJ0 657 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 CBX8Q9HC52 389 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
ARHGEF40-203ENST00000554514 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 GPTP24298 496 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 364.8 ms