RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 HCN2Q9UL51 889 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 WWC3Q9ULE0 1092 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 BIVM-ERCC5R4GMW8 1640 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 EIF1AYO14602 144 aaKnown RBP7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 PHACTR2O75167 634 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 RARAP10276 462 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 BHMTQ93088 406 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 SLC30A3Q99726 388 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 CFHR5Q9BXR6 569 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
MTHFD1-206ENST00000554353 UNCXA6NJT0 531 aa7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 CPNE3O75131 537 aaKnown RBP7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 NFKB1P19838 968 aa7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 CTBSQ01459 385 aa7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 C1orf127Q8N9H9 656 aa7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 GRIN2AQ12879 1464 aa7.85□□□□□ -1.15
MTHFD1-206ENST00000554353 ADAMTS12P58397 1594 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 E9PSI1 815 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 USPL1Q5W0Q7 1092 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 NPAS3Q8IXF0 933 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 NANOS1Q8WY41 292 aaKnown RBP7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 ZFYVE28Q9HCC9 887 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 CNTN3Q9P232 1028 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 ZFATQ9P243 1243 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 PRR12Q9ULL5 1215 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
MTHFD1-206ENST00000554353 MMP20O60882 483 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 PRPF40AO75400 957 aaKnown RBP7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 POLR3DP05423 398 aaPredicted RBP7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 XPCQ01831 940 aaPredicted RBP7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 ALG1LQ6GMV1 187 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 MRRFQ96E11 262 aaKnown RBP7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 DNAJC25Q9H1X3 360 aa7.83□□□□□ -1.16
MTHFD1-206ENST00000554353 EREGO14944 169 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 CYP2E1P05181 493 aaPredicted RBP7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 BMP4P12644 408 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 CES1P23141 567 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 FGD1P98174 961 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 ZSCAN1Q8NBB4 408 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 CHRDQ9H2X0 955 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 IGFLR1Q9H665 355 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 RNF19AQ9NV58 838 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 PARP2Q9UGN5 583 aa7.82□□□□□ -1.16
MTHFD1-206ENST00000554353 FHAD1B1AJZ9 1412 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 NUP160Q12769 1436 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 PSAPP07602 524 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 TBC1D8BQ0IIM8 1120 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 FAM182BQ5T319 152 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 CCDC74AQ96AQ1 378 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 FAM161BQ96MY7 647 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 ERICH3Q5RHP9 1530 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 SHROOM2Q13796 1616 aa7.81□□□□□ -1.16
MTHFD1-206ENST00000554353 VSIG8P0DPA2 414 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 MX2P20592 715 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 GMPRP36959 345 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 PSMD2Q13200 908 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 GPR161Q8N6U8 529 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 PMEPA1Q969W9 287 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 EFCC1Q9HA90 598 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 MRS2Q9HD23 443 aa7.8□□□□□ -1.16
MTHFD1-206ENST00000554353 C2CD2LO14523 706 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 IGSF3O75054 1194 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 IRS1P35568 1242 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 PCBP4P57723 403 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 DHX32Q7L7V1 743 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 FBF1Q8TES7 1133 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 NPHS2Q9NP85 383 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 NLRP2Q9NX02 1062 aa7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 TLR7Q9NYK1 1049 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.79□□□□□ -1.16
MTHFD1-206ENST00000554353 MAP3K6O95382 1288 aa7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 PLAURQ03405 335 aa7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 GAS6Q14393 721 aa7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 PI16Q6UXB8 463 aa7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 IRF7Q92985 503 aa7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 NSUN5Q96P11 429 aaKnown RBP7.78□□□□□ -1.16
MTHFD1-206ENST00000554353 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 MLLT1Q03111 559 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 HYAL2Q12891 473 aa7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 XP32Q5T750 250 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms