RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
PPP4R3A-201ENST00000554308 TTLL11Q8NHH1 800 aa17.54■□□□□ 0.4
PPP4R3A-201ENST00000554308 CSF1RP07333 972 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 ITGA6P23229 1130 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 KCNJ4P48050 445 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 SNX14Q9Y5W7 946 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 TJP1Q07157 1748 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 MPNDQ8N594 471 aa17.53■□□□□ 0.4
PPP4R3A-201ENST00000554308 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
PPP4R3A-201ENST00000554308 HIP1O00291 1037 aa17.52■□□□□ 0.4
PPP4R3A-201ENST00000554308 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 UQCRHP07919 91 aa17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 CTSWP56202 376 aa17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 ARID3AQ99856 593 aa17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.39
PPP4R3A-201ENST00000554308 GOLIM4O00461 696 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 CIAO1O76071 339 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 BRD1O95696 1058 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 CPA1P15085 419 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 GORABQ5T7V8 394 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 SUSD4Q5VX71 490 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 HAUS7Q99871 368 aa17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 GADD45BO75293 160 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-201ENST00000554308 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 SEC62Q99442 399 aaKnown RBP17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 HSPA1LP34931 641 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 CERKQ8TCT0 537 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
PPP4R3A-201ENST00000554308 NWD2Q9ULI1 1742 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 CDHR2Q9BYE9 1310 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 ADORA1P30542 326 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 METTL24Q5JXM2 366 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 PDE8AO60658 829 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 IFIT1P09914 478 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 ADCK5Q3MIX3 580 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 SNRKQ9NRH2 765 aa17.49■□□□□ 0.39
PPP4R3A-201ENST00000554308 TERF1P54274 439 aa17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 CCDC129Q6ZRS4 1044 aa17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 XAGE2Q96GT9 111 aa17.48■□□□□ 0.39
PPP4R3A-201ENST00000554308 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 MBD3O95983 291 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 MCM2P49736 904 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 CUL4AQ13619 759 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 CCDC39Q9UFE4 941 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
PPP4R3A-201ENST00000554308 SH3TC1Q8TE82 1336 aa17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 CCDC158Q5M9N0 1113 aa17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 KBTBD3Q8NAB2 608 aa17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 HELBQ8NG08 1087 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 TSPY26PQ9H489 355 aa17.46■□□□□ 0.39
PPP4R3A-201ENST00000554308 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.38
PPP4R3A-201ENST00000554308 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.38
PPP4R3A-201ENST00000554308 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.38
PPP4R3A-201ENST00000554308 DTNBO60941 627 aa17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 AK2P54819 239 aa17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 ZNF830Q96NB3 372 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
PPP4R3A-201ENST00000554308 ZNF609O15014 1411 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 NUP98P52948 1817 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 TAF5LO75529 589 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 PI16Q6UXB8 463 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms