RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 GRAPLQ8TC17 118 aaPredicted RBP9.38□□□□□ -0.91
TDP1-209ENST00000554180 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
TDP1-209ENST00000554180 PUS3Q9BZE2 481 aaKnown RBP9.38□□□□□ -0.91
TDP1-209ENST00000554180 ECHDC1Q9NTX5 307 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 GLRX3O76003 335 aaKnown RBP9.37□□□□□ -0.91
TDP1-209ENST00000554180 PDE8BO95263 885 aa9.37□□□□□ -0.91
TDP1-209ENST00000554180 PUM3Q15397 648 aaKnown RBP9.37□□□□□ -0.91
TDP1-209ENST00000554180 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
TDP1-209ENST00000554180 RBM17Q96I25 401 aaKnown RBP9.37□□□□□ -0.91
TDP1-209ENST00000554180 CRAMP1Q96RY5 1269 aa9.37□□□□□ -0.91
TDP1-209ENST00000554180 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
TDP1-209ENST00000554180 A0A1B0GUL7 405 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
TDP1-209ENST00000554180 NPR1P16066 1061 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 CHRNDQ07001 517 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 LPIN2Q92539 896 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 ANKRD2Q9GZV1 360 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 MTFR1LQ9H019 292 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 DBNLQ9UJU6 430 aaKnown RBP9.36□□□□□ -0.91
TDP1-209ENST00000554180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.36□□□□□ -0.91
TDP1-209ENST00000554180 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
TDP1-209ENST00000554180 BBOX1O75936 387 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 SRGNP10124 158 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 ATP5JP18859 108 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 FGFR2P21802 821 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-209ENST00000554180 ZNF512BQ96KM6 892 aaPredicted RBP9.35□□□□□ -0.91
TDP1-209ENST00000554180 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 PDGFDQ9GZP0 370 aaPredicted RBP9.35□□□□□ -0.91
TDP1-209ENST00000554180 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
TDP1-209ENST00000554180 TLR7Q9NYK1 1049 aaKnown RBP9.35□□□□□ -0.91
TDP1-209ENST00000554180 MINPP1Q9UNW1 487 aa9.35□□□□□ -0.91
TDP1-209ENST00000554180 ANKRD31Q8N7Z5 1873 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 EIF5BO60841 1220 aaKnown RBP9.34□□□□□ -0.91
TDP1-209ENST00000554180 IFIT1P09914 478 aaKnown RBP9.34□□□□□ -0.91
TDP1-209ENST00000554180 SLC5A1P13866 664 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 POLD1P28340 1107 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 ALDH1B1P30837 517 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 UBE4AQ14139 1066 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 R3HDM1Q15032 1099 aaKnown RBP9.34□□□□□ -0.91
TDP1-209ENST00000554180 C8orf34Q49A92 452 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 CCDC158Q5M9N0 1113 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 STYK1Q6J9G0 422 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 MASTLQ96GX5 879 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 BACH2Q9BYV9 841 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 BCL11AQ9H165 835 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 COL4A1P02462 1669 aa9.34□□□□□ -0.91
TDP1-209ENST00000554180 H0YIN7 160 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 ZBTB22O15209 634 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 CDC45O75419 566 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 SDSP20132 328 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 TIMM10P62072 90 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 TSHZ3Q63HK5 1081 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 CNTROBQ8N137 903 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 NEUROD6Q96NK8 337 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 ARAP2Q8WZ64 1704 aa9.33□□□□□ -0.92
TDP1-209ENST00000554180 XDHP47989 1333 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 UQCRFS1P1P0C7P4 283 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 GORABQ5T7V8 394 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 C2CD5Q86YS7 1000 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 EVI5LQ96CN4 794 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 HAUS7Q99871 368 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 LEMD3Q9Y2U8 911 aa9.32□□□□□ -0.92
TDP1-209ENST00000554180 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
TDP1-209ENST00000554180 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
TDP1-209ENST00000554180 TAF5LO75529 589 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 ZBTB7AO95365 584 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 ARID4AP29374 1257 aaPredicted RBP9.31□□□□□ -0.92
TDP1-209ENST00000554180 ADORA1P30542 326 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 KCNJ4P48050 445 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 TTC39AQ5SRH9 613 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 CCDC102BQ68D86 513 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 C15orf52Q6ZUT6 534 aaKnown RBP9.31□□□□□ -0.92
TDP1-209ENST00000554180 SP8Q8IXZ3 490 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 HELBQ8NG08 1087 aaPredicted RBP9.31□□□□□ -0.92
TDP1-209ENST00000554180 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
TDP1-209ENST00000554180 A0A1B0GUL6 1792 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 HIP1O00291 1037 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 TGFB2P61812 414 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 CAVIN4Q5BKX8 364 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 TMX4Q9H1E5 349 aaPredicted RBP9.3□□□□□ -0.92
TDP1-209ENST00000554180 BOLA2Q9H3K6 86 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 GNL3LQ9NVN8 582 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms