RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 HSPA6P17066 643 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 ITGA6P23229 1130 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 GYG1P46976 350 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 PDE4CQ08493 712 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 TCIRG1Q13488 830 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 DEFB115Q30KQ5 88 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 WWC1Q8IX03 1113 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 DNAAF4Q8WXU2 420 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 GREM2Q9H772 168 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 DDX21Q9NR30 783 aaKnown RBP eCLIP3.12□□□□□ -1.912e-13■□□□□ 9.6
PRPF39-205ENST00000554081 PLA2G2EQ9NZK7 142 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 NAP1L2Q9ULW6 460 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 ANGEL1Q9UNK9 670 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 PA2G4Q9UQ80 394 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 PPLO60437 1756 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 USP31Q70CQ4 1352 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 SOS1Q07889 1333 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 GLTPD2A6NH11 291 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 AOC2O75106 756 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 SURF6O75683 361 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 BCAR3O75815 825 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 IDH1O75874 414 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 SRGNP10124 158 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 LBX1P52954 281 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 IRX5P78411 483 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 DLGAP5Q15398 846 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 ANGEL2Q5VTE6 544 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 NLRP10Q86W26 655 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 RTKN2Q8IZC4 609 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 SMC1BQ8NDV3 1235 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 EYA3Q99504 573 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 DNAJC2Q99543 621 aaKnown RBP3.12□□□□□ -1.91
PRPF39-205ENST00000554081 BCL2L12Q9HB09 334 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 IL1RAPL2Q9NP60 686 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 GGA3Q9NZ52 723 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 CEP126Q9P2H0 1117 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 LRP2BPQ9P2M1 347 aa3.12□□□□□ -1.91
PRPF39-205ENST00000554081 BCL9O00512 1426 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 CARMIL3Q8ND23 1372 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 ADM5C9JUS6 153 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 SRGAP3O43295 1099 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NEFLP07196 543 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 HSPA1AP0DMV8 641 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 HSPA1BP0DMV9 641 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 CXCL9Q07325 125 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 IKQ13123 557 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 G3BP1Q13283 466 aaKnown RBP eCLIP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 CAVIN4Q5BKX8 364 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 RC3H1Q5TC82 1133 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 C2orf69Q8N8R5 385 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NOL10Q9BSC4 688 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 COG6Q9Y2V7 657 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NDUFB9Q9Y6M9 179 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 SDK1Q7Z5N4 2213 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NWD1Q149M9 1564 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NFKBIEO00221 500 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 PSMD14O00487 310 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 MPHOSPH10O00566 681 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 KDM4AO75164 1064 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 TIMM10P62072 90 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 TNIP1Q15025 636 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 PARP10Q53GL7 1025 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 COL13A1Q5TAT6 717 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 DZIP1Q86YF9 867 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 PANK1Q8TE04 598 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 NOB1Q9ULX3 412 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 TTF2Q9UNY4 1162 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 XIRP1Q702N8 1843 aaKnown RBP3.11□□□□□ -1.91
PRPF39-205ENST00000554081 CD163L1Q9NR16 1453 aa3.11□□□□□ -1.91
PRPF39-205ENST00000554081 ECE2O60344 883 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 WDHD1O75717 1129 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 MAP4K4O95819 1239 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 NBR1Q14596 966 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 NKX1-1Q15270 411 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 MFSD14BQ5SR56 506 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 PLBD2Q8NHP8 589 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 PUS3Q9BZE2 481 aaKnown RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CCDC8Q9H0W5 538 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 XRN1Q8IZH2 1706 aaKnown RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 QRICH2Q9H0J4 1663 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 TTC28Q96AY4 2481 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 RTL1A6NKG5 1358 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 ZNF541Q9H0D2 1346 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 DLC1Q96QB1 1528 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 FAM196BA6NMK8 535 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 IFIT1P09914 478 aaKnown RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 USP17L8P0C7I0 530 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 SOX10P56693 466 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 GPSM2P81274 684 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 KSR2Q6VAB6 950 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 TBC1D9Q6ZT07 1266 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CRACR2BQ8N4Y2 399 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 BBXQ8WY36 941 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 SSH1Q8WYL5 1049 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 SLC10A4Q96EP9 437 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 TDRD3Q9H7E2 651 aaKnown RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 TRIM35Q9UPQ4 493 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 TNNQ9UQP3 1299 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 EXOC6BQ9Y2D4 811 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms