RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 FZD5Q13467 585 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 SLC51AQ86UW1 340 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 TMEM130Q8N3G9 435 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 PLD4Q96BZ4 506 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 UBL7Q96S82 380 aaPredicted RBP6.54□□□□□ -1.36
LINC00648-201ENST00000553747 STOML1Q9UBI4 398 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 SERPINA10Q9UK55 444 aa6.54□□□□□ -1.36
LINC00648-201ENST00000553747 DGKZQ13574 1117 aa6.53□□□□□ -1.36
LINC00648-201ENST00000553747 SETDB1Q15047 1291 aa6.53□□□□□ -1.36
LINC00648-201ENST00000553747 ARXQ96QS3 562 aa6.53□□□□□ -1.36
LINC00648-201ENST00000553747 NOVA2Q9UNW9 492 aaKnown RBP6.53□□□□□ -1.36
LINC00648-201ENST00000553747 ARID3CA6NKF2 412 aa6.52□□□□□ -1.37
LINC00648-201ENST00000553747 IGFBP4P22692 258 aa6.52□□□□□ -1.37
LINC00648-201ENST00000553747 ARSDP51689 593 aa6.52□□□□□ -1.37
LINC00648-201ENST00000553747 Q6ZS46 218 aa6.52□□□□□ -1.37
LINC00648-201ENST00000553747 NSUN5Q96P11 429 aaKnown RBP6.52□□□□□ -1.37
LINC00648-201ENST00000553747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
LINC00648-201ENST00000553747 NRLP54845 237 aa6.51□□□□□ -1.37
LINC00648-201ENST00000553747 ZDHHC13Q8IUH4 622 aa6.51□□□□□ -1.37
LINC00648-201ENST00000553747 ARMC10Q8N2F6 343 aa6.51□□□□□ -1.37
LINC00648-201ENST00000553747 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
LINC00648-201ENST00000553747 TLR7Q9NYK1 1049 aaKnown RBP6.51□□□□□ -1.37
LINC00648-201ENST00000553747 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
LINC00648-201ENST00000553747 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
LINC00648-201ENST00000553747 MICAL2O94851 1124 aa6.5□□□□□ -1.37
LINC00648-201ENST00000553747 WISP1O95388 367 aa6.5□□□□□ -1.37
LINC00648-201ENST00000553747 SPINK2P20155 84 aa6.5□□□□□ -1.37
LINC00648-201ENST00000553747 SIK1P57059 783 aa6.5□□□□□ -1.37
LINC00648-201ENST00000553747 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.5□□□□□ -1.37
LINC00648-201ENST00000553747 GSC2O15499 205 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 GHRHP01286 108 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 WEE1P30291 646 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 ELOAQ14241 798 aaKnown RBP6.49□□□□□ -1.37
LINC00648-201ENST00000553747 TXNDC11Q6PKC3 985 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 CMTR1Q8N1G2 835 aaKnown RBP6.49□□□□□ -1.37
LINC00648-201ENST00000553747 GALNT11Q8NCW6 608 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
LINC00648-201ENST00000553747 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
LINC00648-201ENST00000553747 HMX2A2RU54 273 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 DHX15O43143 795 aaKnown RBP6.48□□□□□ -1.37
LINC00648-201ENST00000553747 FOXO3O43524 673 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 MMP20O60882 483 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 NFIAQ12857 509 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 QTRT2Q9H974 415 aaKnown RBP6.48□□□□□ -1.37
LINC00648-201ENST00000553747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC00648-201ENST00000553747 KCNK4Q9NYG8 393 aa6.48□□□□□ -1.37
LINC00648-201ENST00000553747 ACIN1Q9UKV3 1341 aaKnown RBP6.48□□□□□ -1.37
LINC00648-201ENST00000553747 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 OPLAHO14841 1288 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 XYLBO75191 536 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 ATG7O95352 703 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 ARID4AP29374 1257 aaPredicted RBP6.47□□□□□ -1.37
LINC00648-201ENST00000553747 CDC25BP30305 580 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 SRPK2P78362 688 aaKnown RBP6.47□□□□□ -1.37
LINC00648-201ENST00000553747 ACAD11Q709F0 780 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 RGL4Q8IZJ4 473 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 ZMIZ1Q9ULJ6 1067 aa6.47□□□□□ -1.37
LINC00648-201ENST00000553747 PSAPP07602 524 aa6.46□□□□□ -1.38
LINC00648-201ENST00000553747 GRIK1P39086 918 aa6.46□□□□□ -1.38
LINC00648-201ENST00000553747 STK32AQ8WU08 396 aa6.46□□□□□ -1.38
LINC00648-201ENST00000553747 UTP4Q969X6 686 aaKnown RBP6.46□□□□□ -1.38
LINC00648-201ENST00000553747 PRMT3O60678 531 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 WNT11O96014 354 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 INTS5Q6P9B9 1019 aaKnown RBP6.45□□□□□ -1.38
LINC00648-201ENST00000553747 DTX1Q86Y01 620 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 CCDC82Q8N4S0 544 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 PRIMPOLQ96LW4 560 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 CARD10Q9BWT7 1032 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 ADGRE2Q9UHX3 823 aa6.45□□□□□ -1.38
LINC00648-201ENST00000553747 C11orf91Q3C1V1 193 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 TMEM164Q5U3C3 297 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 RNF43Q68DV7 783 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 MAP4K3Q8IVH8 894 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 RBSNQ9H1K0 784 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 SRA1Q9HD15 236 aaKnown RBP6.44□□□□□ -1.38
LINC00648-201ENST00000553747 PPME1Q9Y570 386 aa6.44□□□□□ -1.38
LINC00648-201ENST00000553747 DDX3YO15523 660 aaKnown RBP6.43□□□□□ -1.38
LINC00648-201ENST00000553747 EGFRP00533 1210 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
LINC00648-201ENST00000553747 CD68P34810 354 aaPredicted RBP6.43□□□□□ -1.38
LINC00648-201ENST00000553747 ADAMTSL4Q6UY14 1074 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 CEP41Q9BYV8 373 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 LRFN2Q9ULH4 789 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
LINC00648-201ENST00000553747 JAG1P78504 1218 aa6.42□□□□□ -1.38
LINC00648-201ENST00000553747 ATP11AP98196 1134 aa6.42□□□□□ -1.38
LINC00648-201ENST00000553747 FAM69CQ0P6D2 419 aa6.42□□□□□ -1.38
LINC00648-201ENST00000553747 FKBP5Q13451 457 aaPredicted RBP6.42□□□□□ -1.38
LINC00648-201ENST00000553747 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
LINC00648-201ENST00000553747 TREML1Q86YW5 311 aa6.42□□□□□ -1.38
LINC00648-201ENST00000553747 FAM46AQ96IP4 442 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms