RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 CHAF1AQ13111 956 aaPredicted RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 UTP14CQ5TAP6 766 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 FOXD4L5Q5VV16 416 aaPredicted RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 CREB3L3Q68CJ9 461 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 CWC27Q6UX04 472 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 ABTB2Q8N961 1025 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 TDRD7Q8NHU6 1098 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 FOXD4L4Q8WXT5 416 aaPredicted RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 PKNOX2Q96KN3 472 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 SLC26A8Q96RN1 970 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 LLPHQ9BRT6 129 aaKnown RBP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 ZMYND15Q9H091 742 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 NUP62CLQ9H1M0 184 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 DDX21Q9NR30 783 aaKnown RBP eCLIP6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 KIF3AQ9Y496 699 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 C5P01031 1676 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 GLI3P10071 1580 aa6.23□□□□□ -1.41
TMEM55B-204ENST00000553602 PKD1L3Q7Z443 1732 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 SETD1BQ9UPS6 1966 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 PALLDQ8WX93 1383 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 BTBD11A6QL63 1104 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 SLC27A2O14975 620 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 CTAGE5O15320 804 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 CTIFO43310 598 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 NEMFO60524 1076 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 KCNA6P17658 529 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 RPS6KB1P23443 525 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 PTH1RQ03431 593 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 DNM1Q05193 864 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 OS9Q13438 667 aaPredicted RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 DHX8Q14562 1220 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 AMHR2Q16671 573 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 ME3Q16798 604 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 ADCK5Q3MIX3 580 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 PRPF40BQ6NWY9 871 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 ZNF530Q6P9A1 599 aaPredicted RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 BLOC1S2Q6QNY1 142 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 SARM1Q6SZW1 724 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 NOL8Q76FK4 1167 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 CCDC83Q8IWF9 413 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 PTCD2Q8WV60 388 aaKnown RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 CLSTN2Q9H4D0 955 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 ZSCAN16Q9H4T2 348 aaPredicted RBP6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 FAM13BQ9NYF5 915 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 METRNQ9UJH8 293 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 TCHHQ07283 1943 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 ALS2Q96Q42 1657 aa6.22□□□□□ -1.41
TMEM55B-204ENST00000553602 RGPD2P0DJD1 1756 aa6.21□□□□□ -1.41
TMEM55B-204ENST00000553602 MYH15Q9Y2K3 1946 aa6.21□□□□□ -1.41
TMEM55B-204ENST00000553602 ADAMTSL3P82987 1691 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 SASH1O94885 1247 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 SLC34A2O95436 690 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 HMGB1P09429 215 aaKnown RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 ATP5JP18859 108 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 TYRO3Q06418 890 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 RABL6Q3YEC7 729 aaPredicted RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 C1orf141Q5JVX7 400 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 LARP1BQ659C4 914 aaKnown RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 NAA16Q6N069 864 aaPredicted RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 LARP1Q6PKG0 1096 aaKnown RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 TTC6Q86TZ1 520 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 AACSQ86V21 672 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 ARHGEF25Q86VW2 580 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 PLA2G4DQ86XP0 818 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 FBXL16Q8N461 479 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 ANKRD7Q92527 254 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 GTF3C6Q969F1 213 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 NBPF4Q96M43 638 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 KCNF1Q9H3M0 494 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 COPRSQ9NQ92 184 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 TPCN1Q9ULQ1 816 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 SH3TC1Q8TE82 1336 aa6.21□□□□□ -1.42
TMEM55B-204ENST00000553602 DDX60Q8IY21 1712 aaKnown RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 POTEFA5A3E0 1075 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 VPS37CA5D8V6 355 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 RESTQ13127 1097 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 PTGDRQ13258 359 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 G3BP1Q13283 466 aaKnown RBP eCLIP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 TOB2Q14106 344 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 DNTTIP2Q5QJE6 756 aaKnown RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 CDC37L1Q7L3B6 337 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 PDCL2Q8N4E4 241 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 SMARCC2Q8TAQ2 1214 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 LEO1Q8WVC0 666 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 NECTIN2Q92692 538 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 EAF2Q96CJ1 260 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 KAZALD1Q96I82 304 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 FEZ1Q99689 392 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 AGXT2Q9BYV1 514 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms