RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 AKAP2Q9Y2D5 859 aa16.85■□□□□ 0.29
APEX1-205ENST00000553555 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
APEX1-205ENST00000553555 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
APEX1-205ENST00000553555 TIMM10P62072 90 aa16.84■□□□□ 0.29
APEX1-205ENST00000553555 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
APEX1-205ENST00000553555 VGLL2Q8N8G2 317 aa16.84■□□□□ 0.29
APEX1-205ENST00000553555 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
APEX1-205ENST00000553555 GPATCH3Q96I76 525 aa16.84■□□□□ 0.29
APEX1-205ENST00000553555 PDGFDQ9GZP0 370 aaPredicted RBP16.84■□□□□ 0.29
APEX1-205ENST00000553555 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
APEX1-205ENST00000553555 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
APEX1-205ENST00000553555 ERC2O15083 957 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 PDE8BO95263 885 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
APEX1-205ENST00000553555 CRY2Q49AN0 593 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
APEX1-205ENST00000553555 ZNF609O15014 1411 aa16.83■□□□□ 0.28
APEX1-205ENST00000553555 A0A1B0GUL7 405 aa16.82■□□□□ 0.28
APEX1-205ENST00000553555 GLRX3O76003 335 aaKnown RBP16.82■□□□□ 0.28
APEX1-205ENST00000553555 SDSP20132 328 aa16.82■□□□□ 0.28
APEX1-205ENST00000553555 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
APEX1-205ENST00000553555 BRIP1Q9BX63 1249 aa16.82■□□□□ 0.28
APEX1-205ENST00000553555 ATP2B3Q16720 1220 aa16.81■□□□□ 0.28
APEX1-205ENST00000553555 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
APEX1-205ENST00000553555 CHRNDQ07001 517 aa16.8■□□□□ 0.28
APEX1-205ENST00000553555 GRAPQ13588 217 aa16.8■□□□□ 0.28
APEX1-205ENST00000553555 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
APEX1-205ENST00000553555 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
APEX1-205ENST00000553555 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
APEX1-205ENST00000553555 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
APEX1-205ENST00000553555 ATP5JP18859 108 aa16.79■□□□□ 0.28
APEX1-205ENST00000553555 FGFR2P21802 821 aa16.79■□□□□ 0.28
APEX1-205ENST00000553555 HOXA10P31260 410 aaPredicted RBP16.79■□□□□ 0.28
APEX1-205ENST00000553555 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
APEX1-205ENST00000553555 MINPP1Q9UNW1 487 aa16.79■□□□□ 0.28
APEX1-205ENST00000553555 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 TAF5LO75529 589 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 PDE6BP35913 854 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
APEX1-205ENST00000553555 CDC45O75419 566 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 ADORA1P30542 326 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 LPIN2Q92539 896 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
APEX1-205ENST00000553555 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.27
APEX1-205ENST00000553555 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.27
APEX1-205ENST00000553555 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 SEC24BO95487 1268 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 SRGNP10124 158 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 CCDC158Q5M9N0 1113 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 TBC1D9Q6ZT07 1266 aa16.76■□□□□ 0.27
APEX1-205ENST00000553555 SNAP23O00161 211 aa16.75■□□□□ 0.27
APEX1-205ENST00000553555 BBOX1O75936 387 aa16.75■□□□□ 0.27
APEX1-205ENST00000553555 SLC5A1P13866 664 aa16.75■□□□□ 0.27
APEX1-205ENST00000553555 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
APEX1-205ENST00000553555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
APEX1-205ENST00000553555 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
APEX1-205ENST00000553555 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
APEX1-205ENST00000553555 NPR1P16066 1061 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 HAUS7Q99871 368 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 CACNA1SQ13698 1873 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
APEX1-205ENST00000553555 TTC39AQ5SRH9 613 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
APEX1-205ENST00000553555 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
APEX1-205ENST00000553555 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
APEX1-205ENST00000553555 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
APEX1-205ENST00000553555 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
APEX1-205ENST00000553555 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
APEX1-205ENST00000553555 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
APEX1-205ENST00000553555 KIF13BQ9NQT8 1826 aa16.72■□□□□ 0.27
APEX1-205ENST00000553555 LRRC37AA6NMS7 1700 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 WTIPA6NIX2 430 aaPredicted RBP16.71■□□□□ 0.27
APEX1-205ENST00000553555 H0YIN7 160 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 ZBTB7AO95365 584 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 CHMLP26374 656 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
APEX1-205ENST00000553555 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 PHKA1P46020 1223 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 STYK1Q6J9G0 422 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
APEX1-205ENST00000553555 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 ARID4AP29374 1257 aaPredicted RBP16.7■□□□□ 0.26
APEX1-205ENST00000553555 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 EDC3Q96F86 508 aaKnown RBP16.7■□□□□ 0.26
APEX1-205ENST00000553555 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
APEX1-205ENST00000553555 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
APEX1-205ENST00000553555 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
APEX1-205ENST00000553555 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
APEX1-205ENST00000553555 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
APEX1-205ENST00000553555 ZNF804BA4D1E1 1349 aa16.69■□□□□ 0.26
APEX1-205ENST00000553555 XDHP47989 1333 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms